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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180296594
OBJA01001045
145543
Betaproteobacteria
CGG
Pro
>WENV180298376
OBJA01302307
155690
Betaproteobacteria
TCT
Arg
>WENV180298098
OBJA01166972
339413
Betaproteobacteria
GGT
Thr
>WENV180296503
OBJA01000684
236112
Betaproteobacteria
GAA
Phe
>WENV180297519
OBJA01038927
68998
Betaproteobacteria
CAG
Leu
>WENV180297717
OBJA01068802
238204
Betaproteobacteria
TGC
Ala
>WENV180298226
OBJA01226790
338673
Betaproteobacteria
GGT
Thr
>WENV180296724
OBJA01002001
338673
Betaproteobacteria
GGT
Thr
>WENV180298369
OBJA01301165
86049
Betaproteobacteria
GTA
Tyr
>WENV180296574
OBJA01000940
236106
Betaproteobacteria
CAT
Met
>WENV180297551
OBJA01044122
147506
Betaproteobacteria
CAT
Met
>WENV180296605
OBJA01001138
147506
Betaproteobacteria
CAT
Met
>WENV180297238
OBJA01016751
412344
Betaproteobacteria
GCA
Cys
>WENV180297398
OBJA01028302
352197
Betaproteobacteria
GGT
Thr
>WENV180296862
OBJA01003943
253278
Betaproteobacteria
TTT
Lys
>WENV180297936
OBJA01118338
160841
Betaproteobacteria
TTG
Gln
>WENV180297602
OBJA01049411
4907
Betaproteobacteria
GCT
Ser
>WENV180297607
OBJA01050316
96979
Betaproteobacteria
GAG
Leu
>WENV180296811
OBJA01003058
188521
Betaproteobacteria
GGG
Pro
>WENV180296757
OBJA01002376
95723
Betaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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