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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180317451
OBKK01000067
235097
Bacteroidota
TTT
Lys
>WENV180317553
OBKK01000393
235097
Bacteroidota
TTT
Lys
>WENV180317560
OBKK01000448
235097
Bacteroidota
TTT
Lys
>WENV180317500
OBKK01000118
339412
Bacteroidota
GGT
Thr
>WENV180317459
OBKK01000081
235102
Bacteroidota
CGT
Thr
>WENV180317445
OBKK01000052
237796
Bacteroidota
CGT
Thr
>WENV180317666
OBKK01008306
243025
Bacteroidota
CAT
Met
>WENV180317550
OBKK01000377
343138
Bacteroidota
CCT
Arg
>WENV180317657
OBKK01006573
17323
Bacteroidota
GGA
Ser
>WENV180317494
OBKK01000109
394247
Bacteroidota
CTC
Glu
>WENV180317493
OBKK01000109
394247
Bacteroidota
CTC
Glu
>WENV180317492
OBKK01000109
394247
Bacteroidota
CTC
Glu
>WENV180317521
OBKK01000180
413663
Bacteroidota
CTG
Gln
>WENV180317512
OBKK01000152
436206
Bacteroidota
TTG
Gln
>WENV180317450
OBKK01000059
147147
Bacteroidota
GTG
His
>WENV180317508
OBKK01000128
155123
Bacteroidota
GTT
Asn
>WENV180317447
OBKK01000054
338124
Bacteroidota
CCG
Arg
>WENV180317853
OBKK01147586
126641
Bacteroidota
TAC
Val
>WENV180317425
OBKK01000013
338132
Bacteroidota
GCA
Cys
>WENV180317852
OBKK01147230
193809
Bacteroidota
CAT
Met
>WENV180317452
OBKK01000068
301449
Bacteroidota
CGG
Pro
>WENV180317404
OBKK01000001
144656
Bacteroidota
GTG
His
>WENV180317528
OBKK01000210
235207
Bacteroidota
CAT
Met
>WENV180317417
OBKK01000007
143169
Bacteroidota
GGG
Pro
>WENV180317509
OBKK01000134
80607
Bacteroidota
GTA
Tyr
>WENV180317436
OBKK01000031
412235
Bacteroidota
>WENV180317748
OBKK01033250
154643
Bacteroidota
CAT
Met
>WENV180317562
OBKK01000495
144590
Bacteroidota
GTT
Asn
>WENV180317424
OBKK01000012
144590
Bacteroidota
GTT
Asn
>WENV180317439
OBKK01000044
95559
Bacteroidota
TAG
Leu
>WENV180317413
OBKK01000003
144655
Bacteroidota
GGC
Ala
>WENV180317778
OBKK01053843
338164
Bacteroidota
TTC
Glu
>WENV180317423
OBKK01000012
44852
Bacteroidota
TAA
Leu
>WENV180317507
OBKK01000126
95986
Bacteroidota
GTA
Tyr
>WENV180317499
OBKK01000118
95986
Bacteroidota
GTA
Tyr
>WENV180317854
OBKK01147751
338165
Bacteroidota
GGT
Thr
>WENV180317448
OBKK01000055
425638
Bacteroidota
CTG
Gln
>WENV180317802
OBKK01078897
94703
Bacteroidota
GTA
Tyr
>WENV180317725
OBKK01022212
353927
Bacteroidota
TTC
Glu
>WENV180317667
OBKK01008339
414426
Bacteroidota
CTG
Gln
>WENV180317490
OBKK01000109
146764
Bacteroidota
GTC
Asp
>WENV180317489
OBKK01000109
146764
Bacteroidota
GTC
Asp
>WENV180317519
OBKK01000172
59498
Bacteroidota
GAG
Leu
>WENV180317403
OBKK01000001
56823
Bacteroidota
TGA
Ser
>WENV180317503
OBKK01000119
55270
Bacteroidota
TGA
Ser
>WENV180317430
OBKK01000016
16220
Bacteroidota
GGA
Ser
>WENV180317580
OBKK01000654
127023
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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