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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180329863
OBKV01008460
246701
Verrucomicrobiota
TTT
Lys
>WENV180329951
OBKV01012171
345141
Verrucomicrobiota
TTG
Gln
>WENV180329769
OBKV01005957
345133
Verrucomicrobiota
GAC
Val
>WENV180330170
OBKV01022635
82054
Verrucomicrobiota
GTA
Tyr
>WENV180330211
OBKV01027447
246677
Verrucomicrobiota
CTT
Lys
>WENV180330510
OBKV01081881
344845
Verrucomicrobiota
CTG
Gln
>WENV180330073
OBKV01016284
128202
Verrucomicrobiota
GTC
Asp
>WENV180330363
OBKV01048480
414625
Verrucomicrobiota
CCC
Gly
>WENV180329902
OBKV01009679
46246
Verrucomicrobiota
TGA
Ser
>WENV180330195
OBKV01025442
97755
Verrucomicrobiota
TAG
Leu
>WENV180329786
OBKV01006237
246700
Verrucomicrobiota
TTC
Glu
>WENV180330188
OBKV01024664
246687
Verrucomicrobiota
CGC
Ala
>WENV180330364
OBKV01048480
419909
Verrucomicrobiota
TCC
Gly
>WENV180330355
OBKV01046083
344841
Verrucomicrobiota
CAC
Val
>WENV180329631
OBKV01003023
60880
Verrucomicrobiota
CAG
Leu
>WENV180330232
OBKV01029956
82056
Verrucomicrobiota
TAA
Leu
>WENV180330210
OBKV01027447
344842
Verrucomicrobiota
CGT
Thr
>WENV180330039
OBKV01015057
170105
Verrucomicrobiota
CAT
Met
>WENV180330338
OBKV01043112
345123
Verrucomicrobiota
TGT
Thr
>WENV180330493
OBKV01075776
345110
Verrucomicrobiota
CCT
Arg
>WENV180330057
OBKV01015758
344839
Verrucomicrobiota
GTG
His
>WENV180329841
OBKV01007787
7274
Verrucomicrobiota
CGA
Ser
>WENV180330112
OBKV01019178
246260
Verrucomicrobiota
>WENV180330240
OBKV01031532
155268
Verrucomicrobiota
CGG
Pro
>WENV180330044
OBKV01015448
7256
Verrucomicrobiota
GCT
Ser
>WENV180330093
OBKV01017410
345115
Verrucomicrobiota
CAT
Met
>WENV180330178
OBKV01023583
345124
Verrucomicrobiota
GTT
Asn
>WENV180329487
OBKV01001582
17023
Verrucomicrobiota
GGA
Ser
>WENV180330454
OBKV01068010
368497
Verrucomicrobiota
GCC
Gly
>WENV180330184
OBKV01024084
345142
Verrucomicrobiota
CCG
Arg
>WENV180330011
OBKV01014707
246709
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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