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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180389742
OBPJ01111885
381459
Alphaproteobacteria
CAC
Val
>WENV180389511
OBPJ01032739
365250
Alphaproteobacteria
GCC
Gly
>WENV180389305
OBPJ01001133
306070
Alphaproteobacteria
CCA
Trp
>WENV180389571
OBPJ01047374
113700
Alphaproteobacteria
>WENV180389378
OBPJ01008808
176908
Alphaproteobacteria
GTC
Asp
>WENV180389600
OBPJ01056943
338282
Alphaproteobacteria
GTT
Asn
>WENV180389307
OBPJ01001450
147083
Alphaproteobacteria
GGG
Pro
>WENV180389651
OBPJ01075120
412279
Alphaproteobacteria
CCC
Gly
>WENV180389535
OBPJ01037562
23672
Alphaproteobacteria
GCT
Ser
>WENV180389427
OBPJ01014582
23672
Alphaproteobacteria
GCT
Ser
>WENV180389492
OBPJ01027400
341164
Alphaproteobacteria
GCC
Gly
>WENV180389609
OBPJ01058822
359842
Alphaproteobacteria
GAC
Val
>WENV180389558
OBPJ01044429
82948
Alphaproteobacteria
CAA
Leu
>WENV180389563
OBPJ01045267
344517
Alphaproteobacteria
GTT
Asn
>WENV180389294
OBPJ01000429
154227
Alphaproteobacteria
CAT
Met
>WENV180389338
OBPJ01003716
412424
Alphaproteobacteria
TCC
Gly
>WENV180389702
OBPJ01093266
113715
Alphaproteobacteria
TAG
Leu
>WENV180389408
OBPJ01012628
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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