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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180407972
OBUS01000039
144657
Bacteroidota
CGG
Pro
>WENV180407889
OBUS01000002
339341
Bacteroidota
GGT
Thr
>WENV180407911
OBUS01000007
343138
Bacteroidota
CCT
Arg
>WENV180407981
OBUS01000042
343138
Bacteroidota
CCT
Arg
>WENV180407925
OBUS01000011
58715
Bacteroidota
GAG
Leu
>WENV180408231
OBUS01000298
46165
Bacteroidota
TGA
Ser
>WENV180407892
OBUS01000003
338486
Bacteroidota
CAT
Met
>WENV180407999
OBUS01000057
338486
Bacteroidota
CAT
Met
>WENV180407969
OBUS01000039
59689
Bacteroidota
CAG
Leu
>WENV180407924
OBUS01000011
59689
Bacteroidota
CAG
Leu
>WENV180408018
OBUS01000071
235203
Bacteroidota
TTT
Lys
>WENV180407928
OBUS01000011
235203
Bacteroidota
TTT
Lys
>WENV180408229
OBUS01000298
238121
Bacteroidota
CTT
Lys
>WENV180408228
OBUS01000298
238121
Bacteroidota
CTT
Lys
>WENV180407985
OBUS01000044
338132
Bacteroidota
GCA
Cys
>WENV180408230
OBUS01000298
45423
Bacteroidota
TGA
Ser
>WENV180408036
OBUS01000083
58714
Bacteroidota
CAA
Leu
>WENV180408254
OBUS01000324
144659
Bacteroidota
GTG
His
>WENV180408253
OBUS01000324
144659
Bacteroidota
GTG
His
>WENV180407973
OBUS01000039
235180
Bacteroidota
CCA
Trp
>WENV180408320
OBUS01000514
80614
Bacteroidota
>WENV180407927
OBUS01000011
80614
Bacteroidota
>WENV180407888
OBUS01000002
80614
Bacteroidota
>WENV180407909
OBUS01000007
338164
Bacteroidota
TTC
Glu
>WENV180407908
OBUS01000007
338164
Bacteroidota
TTC
Glu
>WENV180408242
OBUS01000315
95875
Bacteroidota
TAG
Leu
>WENV180407893
OBUS01000003
240012
Bacteroidota
CCC
Gly
>WENV180408147
OBUS01000207
147439
Bacteroidota
TCT
Arg
>WENV180407984
OBUS01000044
411550
Bacteroidota
CTG
Gln
>WENV180407983
OBUS01000044
411550
Bacteroidota
CTG
Gln
>WENV180407980
OBUS01000041
425638
Bacteroidota
CTG
Gln
>WENV180408191
OBUS01000244
185921
Bacteroidota
GTC
Asp
>WENV180408190
OBUS01000244
185921
Bacteroidota
GTC
Asp
>WENV180408269
OBUS01000357
23696
Bacteroidota
GCT
Ser
>WENV180408013
OBUS01000069
235129
Bacteroidota
GCC
Gly
>WENV180408011
OBUS01000069
235129
Bacteroidota
GCC
Gly
>WENV180407923
OBUS01000011
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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