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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180418249
OBVJ01000987
119661
Verrucomicrobiota
CAA
Leu
>WENV180418109
OBVJ01000270
155256
Verrucomicrobiota
TCT
Arg
>WENV180418264
OBVJ01001161
246701
Verrucomicrobiota
TTT
Lys
>WENV180418219
OBVJ01000804
345141
Verrucomicrobiota
TTG
Gln
>WENV180418296
OBVJ01001581
345133
Verrucomicrobiota
GAC
Val
>WENV180418274
OBVJ01001306
82054
Verrucomicrobiota
GTA
Tyr
>WENV180418218
OBVJ01000791
246677
Verrucomicrobiota
CTT
Lys
>WENV180418217
OBVJ01000791
246677
Verrucomicrobiota
CTT
Lys
>WENV180418140
OBVJ01000397
344844
Verrucomicrobiota
GCA
Cys
>WENV180418166
OBVJ01000536
155264
Verrucomicrobiota
GGG
Pro
>WENV180418321
OBVJ01001985
344845
Verrucomicrobiota
CTG
Gln
>WENV180418253
OBVJ01001063
128202
Verrucomicrobiota
GTC
Asp
>WENV180418339
OBVJ01002643
414625
Verrucomicrobiota
CCC
Gly
>WENV180418191
OBVJ01000710
46246
Verrucomicrobiota
TGA
Ser
>WENV180418239
OBVJ01000938
97755
Verrucomicrobiota
TAG
Leu
>WENV180418141
OBVJ01000397
246700
Verrucomicrobiota
TTC
Glu
>WENV180418168
OBVJ01000545
246687
Verrucomicrobiota
CGC
Ala
>WENV180418340
OBVJ01002643
419909
Verrucomicrobiota
TCC
Gly
>WENV180418275
OBVJ01001330
344841
Verrucomicrobiota
CAC
Val
>WENV180418145
OBVJ01000414
82056
Verrucomicrobiota
TAA
Leu
>WENV180418216
OBVJ01000791
344842
Verrucomicrobiota
CGT
Thr
>WENV180418179
OBVJ01000633
170105
Verrucomicrobiota
CAT
Met
>WENV180418127
OBVJ01000352
287733
Verrucomicrobiota
CCA
Trp
>WENV180418265
OBVJ01001178
345123
Verrucomicrobiota
TGT
Thr
>WENV180418229
OBVJ01000865
345110
Verrucomicrobiota
CCT
Arg
>WENV180418231
OBVJ01000884
344839
Verrucomicrobiota
GTG
His
>WENV180418170
OBVJ01000561
7274
Verrucomicrobiota
CGA
Ser
>WENV180418146
OBVJ01000414
246260
Verrucomicrobiota
>WENV180418214
OBVJ01000776
155268
Verrucomicrobiota
CGG
Pro
>WENV180418359
OBVJ01003927
7256
Verrucomicrobiota
GCT
Ser
>WENV180418252
OBVJ01001041
345115
Verrucomicrobiota
CAT
Met
>WENV180418228
OBVJ01000855
345119
Verrucomicrobiota
TAC
Val
>WENV180418144
OBVJ01000412
345124
Verrucomicrobiota
GTT
Asn
>WENV180418096
OBVJ01000256
17023
Verrucomicrobiota
GGA
Ser
>WENV180418266
OBVJ01001186
368497
Verrucomicrobiota
GCC
Gly
>WENV180418110
OBVJ01000270
345142
Verrucomicrobiota
CCG
Arg
>WENV180418232
OBVJ01000884
246709
Verrucomicrobiota
CAT
Met
>WENV180418349
OBVJ01002949
154693
Verrucomicrobiota
TGG
Pro
>WENV180418126
OBVJ01000352
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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