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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180425306
OBVY01000278
119661
Verrucomicrobiota
CAA
Leu
>WENV180425040
OBVY01000060
155256
Verrucomicrobiota
TCT
Arg
>WENV180424962
OBVY01000015
246701
Verrucomicrobiota
TTT
Lys
>WENV180425743
OBVY01001551
345141
Verrucomicrobiota
TTG
Gln
>WENV180425137
OBVY01000128
345133
Verrucomicrobiota
GAC
Val
>WENV180424942
OBVY01000007
82054
Verrucomicrobiota
GTA
Tyr
>WENV180425164
OBVY01000151
246677
Verrucomicrobiota
CTT
Lys
>WENV180425163
OBVY01000151
246677
Verrucomicrobiota
CTT
Lys
>WENV180425141
OBVY01000132
344844
Verrucomicrobiota
GCA
Cys
>WENV180424984
OBVY01000031
155264
Verrucomicrobiota
GGG
Pro
>WENV180425335
OBVY01000309
344845
Verrucomicrobiota
CTG
Gln
>WENV180425528
OBVY01000687
128202
Verrucomicrobiota
GTC
Asp
>WENV180425136
OBVY01000128
128202
Verrucomicrobiota
GTC
Asp
>WENV180425616
OBVY01000926
414625
Verrucomicrobiota
CCC
Gly
>WENV180425116
OBVY01000113
46246
Verrucomicrobiota
TGA
Ser
>WENV180425448
OBVY01000501
97755
Verrucomicrobiota
TAG
Leu
>WENV180425142
OBVY01000132
246700
Verrucomicrobiota
TTC
Glu
>WENV180425118
OBVY01000113
246700
Verrucomicrobiota
TTC
Glu
>WENV180425183
OBVY01000167
246687
Verrucomicrobiota
CGC
Ala
>WENV180425615
OBVY01000926
419909
Verrucomicrobiota
TCC
Gly
>WENV180425129
OBVY01000121
344841
Verrucomicrobiota
CAC
Val
>WENV180425307
OBVY01000278
82056
Verrucomicrobiota
TAA
Leu
>WENV180425162
OBVY01000151
344842
Verrucomicrobiota
CGT
Thr
>WENV180424943
OBVY01000007
170105
Verrucomicrobiota
CAT
Met
>WENV180425182
OBVY01000167
345123
Verrucomicrobiota
TGT
Thr
>WENV180425133
OBVY01000125
345110
Verrucomicrobiota
CCT
Arg
>WENV180425119
OBVY01000113
344839
Verrucomicrobiota
GTG
His
>WENV180425174
OBVY01000161
7274
Verrucomicrobiota
CGA
Ser
>WENV180425308
OBVY01000278
246260
Verrucomicrobiota
>WENV180425161
OBVY01000151
155268
Verrucomicrobiota
CGG
Pro
>WENV180425140
OBVY01000132
82181
Verrucomicrobiota
AAG
Leu
>WENV180424982
OBVY01000031
246728
Verrucomicrobiota
GAA
Phe
>WENV180425309
OBVY01000278
7256
Verrucomicrobiota
GCT
Ser
>WENV180425115
OBVY01000113
345115
Verrucomicrobiota
CAT
Met
>WENV180425135
OBVY01000128
345119
Verrucomicrobiota
TAC
Val
>WENV180424941
OBVY01000007
345124
Verrucomicrobiota
GTT
Asn
>WENV180425220
OBVY01000191
17023
Verrucomicrobiota
GGA
Ser
>WENV180425128
OBVY01000121
368497
Verrucomicrobiota
GCC
Gly
>WENV180425117
OBVY01000113
368497
Verrucomicrobiota
GCC
Gly
>WENV180425041
OBVY01000060
345142
Verrucomicrobiota
CCG
Arg
>WENV180425120
OBVY01000113
246709
Verrucomicrobiota
CAT
Met
>WENV180424983
OBVY01000031
154693
Verrucomicrobiota
TGG
Pro
>WENV180425218
OBVY01000191
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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