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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180447683
OBXD01000999
235097
Bacteroidota
TTT
Lys
>WENV180447787
OBXD01007186
235102
Bacteroidota
CGT
Thr
>WENV180447591
OBXD01000368
144657
Bacteroidota
CGG
Pro
>WENV180447696
OBXD01001220
144657
Bacteroidota
CGG
Pro
>WENV180447451
OBXD01000030
338155
Bacteroidota
CTC
Glu
>WENV180447655
OBXD01000725
150845
Bacteroidota
GTC
Asp
>WENV180447792
OBXD01008121
339341
Bacteroidota
GGT
Thr
>WENV180447453
OBXD01000032
343138
Bacteroidota
CCT
Arg
>WENV180447490
OBXD01000066
58715
Bacteroidota
GAG
Leu
>WENV180447408
OBXD01000011
58715
Bacteroidota
GAG
Leu
>WENV180447436
OBXD01000022
46165
Bacteroidota
TGA
Ser
>WENV180447432
OBXD01000019
95618
Bacteroidota
TAG
Leu
>WENV180447659
OBXD01000828
338486
Bacteroidota
CAT
Met
>WENV180447631
OBXD01000543
338486
Bacteroidota
CAT
Met
>WENV180447605
OBXD01000411
338486
Bacteroidota
CAT
Met
>WENV180447444
OBXD01000028
338486
Bacteroidota
CAT
Met
>WENV180447611
OBXD01000443
48053
Bacteroidota
TGA
Ser
>WENV180447575
OBXD01000274
48053
Bacteroidota
TGA
Ser
>WENV180447523
OBXD01000115
48053
Bacteroidota
TGA
Ser
>WENV180447520
OBXD01000108
48053
Bacteroidota
TGA
Ser
>WENV180447374
OBXD01000001
48053
Bacteroidota
TGA
Ser
>WENV180447821
OBXD01019726
415410
Bacteroidota
TTG
Gln
>WENV180447376
OBXD01000002
411543
Bacteroidota
CTG
Gln
>WENV180447489
OBXD01000066
59689
Bacteroidota
CAG
Leu
>WENV180447483
OBXD01000062
59689
Bacteroidota
CAG
Leu
>WENV180447407
OBXD01000011
59689
Bacteroidota
CAG
Leu
>WENV180447452
OBXD01000031
235182
Bacteroidota
>WENV180447569
OBXD01000239
338124
Bacteroidota
CCG
Arg
>WENV180447550
OBXD01000185
235203
Bacteroidota
TTT
Lys
>WENV180447518
OBXD01000105
235203
Bacteroidota
TTT
Lys
>WENV180447672
OBXD01000906
238121
Bacteroidota
CTT
Lys
>WENV180447671
OBXD01000906
238121
Bacteroidota
CTT
Lys
>WENV180447434
OBXD01000022
238121
Bacteroidota
CTT
Lys
>WENV180447433
OBXD01000022
238121
Bacteroidota
CTT
Lys
>WENV180447719
OBXD01001907
126641
Bacteroidota
TAC
Val
>WENV180447583
OBXD01000328
126641
Bacteroidota
TAC
Val
>WENV180447618
OBXD01000484
338132
Bacteroidota
GCA
Cys
>WENV180447564
OBXD01000222
338132
Bacteroidota
GCA
Cys
>WENV180447514
OBXD01000095
338132
Bacteroidota
GCA
Cys
>WENV180447375
OBXD01000001
338132
Bacteroidota
GCA
Cys
>WENV180447505
OBXD01000089
144688
Bacteroidota
CAT
Met
>WENV180447435
OBXD01000022
45423
Bacteroidota
TGA
Ser
>WENV180447529
OBXD01000129
58714
Bacteroidota
CAA
Leu
>WENV180447536
OBXD01000140
144933
Bacteroidota
TCT
Arg
>WENV180447384
OBXD01000005
144933
Bacteroidota
TCT
Arg
>WENV180447713
OBXD01001597
144656
Bacteroidota
GTG
His
>WENV180447543
OBXD01000171
235207
Bacteroidota
CAT
Met
>WENV180447580
OBXD01000304
144659
Bacteroidota
GTG
His
>WENV180447579
OBXD01000304
144659
Bacteroidota
GTG
His
>WENV180447592
OBXD01000368
235180
Bacteroidota
CCA
Trp
>WENV180447382
OBXD01000004
144596
Bacteroidota
GGC
Ala
>WENV180447388
OBXD01000006
80607
Bacteroidota
GTA
Tyr
>WENV180447686
OBXD01001016
80614
Bacteroidota
>WENV180447630
OBXD01000540
80614
Bacteroidota
>WENV180447568
OBXD01000234
80614
Bacteroidota
>WENV180447590
OBXD01000364
95559
Bacteroidota
TAG
Leu
>WENV180447534
OBXD01000136
419272
Bacteroidota
CTG
Gln
>WENV180447455
OBXD01000032
338164
Bacteroidota
TTC
Glu
>WENV180447454
OBXD01000032
338164
Bacteroidota
TTC
Glu
>WENV180447584
OBXD01000336
95875
Bacteroidota
TAG
Leu
>WENV180447492
OBXD01000068
95875
Bacteroidota
TAG
Leu
>WENV180447717
OBXD01001784
240012
Bacteroidota
CCC
Gly
>WENV180447391
OBXD01000008
240012
Bacteroidota
CCC
Gly
>WENV180447609
OBXD01000433
44852
Bacteroidota
TAA
Leu
>WENV180447390
OBXD01000008
147439
Bacteroidota
TCT
Arg
>WENV180447511
OBXD01000093
411550
Bacteroidota
CTG
Gln
>WENV180447510
OBXD01000093
411550
Bacteroidota
CTG
Gln
>WENV180447501
OBXD01000079
338165
Bacteroidota
GGT
Thr
>WENV180447513
OBXD01000095
23696
Bacteroidota
GCT
Ser
>WENV180447519
OBXD01000108
16224
Bacteroidota
GGA
Ser
>WENV180447535
OBXD01000136
16220
Bacteroidota
GGA
Ser
>WENV180447828
OBXD01023550
235129
Bacteroidota
GCC
Gly
>WENV180447488
OBXD01000066
235129
Bacteroidota
GCC
Gly
>WENV180447406
OBXD01000011
235129
Bacteroidota
GCC
Gly
>WENV180447497
OBXD01000073
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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