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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180453572
OBXM01000244
119661
Verrucomicrobiota
CAA
Leu
>WENV180453810
OBXM01000987
155256
Verrucomicrobiota
TCT
Arg
>WENV180453710
OBXM01000511
246701
Verrucomicrobiota
TTT
Lys
>WENV180453560
OBXM01000229
345141
Verrucomicrobiota
TTG
Gln
>WENV180453487
OBXM01000159
345133
Verrucomicrobiota
GAC
Val
>WENV180453405
OBXM01000085
82054
Verrucomicrobiota
GTA
Tyr
>WENV180453392
OBXM01000069
246677
Verrucomicrobiota
CTT
Lys
>WENV180453391
OBXM01000069
246677
Verrucomicrobiota
CTT
Lys
>WENV180453377
OBXM01000065
344844
Verrucomicrobiota
GCA
Cys
>WENV180453421
OBXM01000097
155264
Verrucomicrobiota
GGG
Pro
>WENV180453561
OBXM01000229
344845
Verrucomicrobiota
CTG
Gln
>WENV180453489
OBXM01000159
128202
Verrucomicrobiota
GTC
Asp
>WENV180453339
OBXM01000040
128202
Verrucomicrobiota
GTC
Asp
>WENV180453449
OBXM01000120
414625
Verrucomicrobiota
CCC
Gly
>WENV180453515
OBXM01000175
46246
Verrucomicrobiota
TGA
Ser
>WENV180453816
OBXM01001008
246700
Verrucomicrobiota
TTC
Glu
>WENV180453378
OBXM01000065
246700
Verrucomicrobiota
TTC
Glu
>WENV180453380
OBXM01000065
246687
Verrucomicrobiota
CGC
Ala
>WENV180453451
OBXM01000120
419909
Verrucomicrobiota
TCC
Gly
>WENV180453337
OBXM01000039
344841
Verrucomicrobiota
CAC
Val
>WENV180453568
OBXM01000244
82056
Verrucomicrobiota
TAA
Leu
>WENV180453390
OBXM01000069
344842
Verrucomicrobiota
CGT
Thr
>WENV180453608
OBXM01000324
170105
Verrucomicrobiota
CAT
Met
>WENV180453565
OBXM01000236
287733
Verrucomicrobiota
CCA
Trp
>WENV180453379
OBXM01000065
345123
Verrucomicrobiota
TGT
Thr
>WENV180453594
OBXM01000284
345110
Verrucomicrobiota
CCT
Arg
>WENV180453817
OBXM01001008
344839
Verrucomicrobiota
GTG
His
>WENV180453566
OBXM01000237
7274
Verrucomicrobiota
CGA
Ser
>WENV180453569
OBXM01000244
246260
Verrucomicrobiota
>WENV180453389
OBXM01000069
155268
Verrucomicrobiota
CGG
Pro
>WENV180453376
OBXM01000065
82181
Verrucomicrobiota
AAG
Leu
>WENV180453422
OBXM01000097
246728
Verrucomicrobiota
GAA
Phe
>WENV180453570
OBXM01000244
7256
Verrucomicrobiota
GCT
Ser
>WENV180453517
OBXM01000175
345115
Verrucomicrobiota
CAT
Met
>WENV180453488
OBXM01000159
345119
Verrucomicrobiota
TAC
Val
>WENV180453404
OBXM01000085
345124
Verrucomicrobiota
GTT
Asn
>WENV180453338
OBXM01000040
17023
Verrucomicrobiota
GGA
Ser
>WENV180453516
OBXM01000175
368497
Verrucomicrobiota
GCC
Gly
>WENV180453336
OBXM01000039
368497
Verrucomicrobiota
GCC
Gly
>WENV180453450
OBXM01000120
345142
Verrucomicrobiota
CCG
Arg
>WENV180453818
OBXM01001008
246709
Verrucomicrobiota
CAT
Met
>WENV180453423
OBXM01000097
154693
Verrucomicrobiota
TGG
Pro
>WENV180453564
OBXM01000236
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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