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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180453569
OBXM01000244
260057
Verrucomicrobiota
>WENV180453580
OBXM01000265
65262
Verrucomicrobiota
CAG
Leu
>WENV180453450
OBXM01000120
370537
Verrucomicrobiota
CCG
Arg
>WENV180453566
OBXM01000237
8030
Verrucomicrobiota
CGA
Ser
>WENV180453390
OBXM01000069
370538
Verrucomicrobiota
CGT
Thr
>WENV180453561
OBXM01000229
370526
Verrucomicrobiota
CTG
Gln
>WENV180453570
OBXM01000244
8029
Verrucomicrobiota
GCT
Ser
>WENV180453480
OBXM01000153
290976
Verrucomicrobiota
GGC
Ala
>WENV180453405
OBXM01000085
88984
Verrucomicrobiota
GTA
Tyr
>WENV180453339
OBXM01000040
139132
Verrucomicrobiota
GTC
Asp
>WENV180453489
OBXM01000159
139132
Verrucomicrobiota
GTC
Asp
>WENV180453568
OBXM01000244
88983
Verrucomicrobiota
TAA
Leu
>WENV180453488
OBXM01000159
370530
Verrucomicrobiota
TAC
Val
>WENV180453593
OBXM01000284
105632
Verrucomicrobiota
TAG
Leu
>WENV180453515
OBXM01000175
50031
Verrucomicrobiota
TGA
Ser
>WENV180453423
OBXM01000097
161141
Verrucomicrobiota
TGG
Pro
>WENV180453379
OBXM01000065
370534
Verrucomicrobiota
TGT
Thr
>WENV180453560
OBXM01000229
370525
Verrucomicrobiota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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