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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180454533
OBXN01000048
235146
Actinomycetota
CGT
Thr
>WENV180454469
OBXN01000008
235347
Actinomycetota
GGC
Ala
>WENV180454470
OBXN01000008
235347
Actinomycetota
GGC
Ala
>WENV180454542
OBXN01000052
166493
Actinomycetota
CTT
Lys
>WENV180454610
OBXN01000136
235194
Actinomycetota
GTG
His
>WENV180454474
OBXN01000008
158720
Actinomycetota
ACG
Arg
>WENV180454475
OBXN01000008
158720
Actinomycetota
ACG
Arg
>WENV180454593
OBXN01000095
411601
Actinomycetota
CCC
Gly
>WENV180454482
OBXN01000010
144826
Actinomycetota
GGG
Pro
>WENV180454581
OBXN01000082
23370
Actinomycetota
GCT
Ser
>WENV180454562
OBXN01000065
338239
Actinomycetota
TTC
Glu
>WENV180454630
OBXN01000205
235174
Actinomycetota
TGC
Ala
>WENV180454541
OBXN01000052
235101
Actinomycetota
TTT
Lys
>WENV180454472
OBXN01000008
121510
Actinomycetota
TAA
Leu
>WENV180454596
OBXN01000102
44855
Actinomycetota
TGA
Ser
>WENV180454578
OBXN01000077
235199
Actinomycetota
CAC
Val
>WENV180454480
OBXN01000010
235199
Actinomycetota
CAC
Val
>WENV180454595
OBXN01000102
44862
Actinomycetota
CGA
Ser
>WENV180454468
OBXN01000008
413665
Actinomycetota
TTG
Gln
>WENV180454575
OBXN01000077
254857
Actinomycetota
CCG
Arg
>WENV180454580
OBXN01000082
144700
Actinomycetota
CAT
Met
>WENV180454539
OBXN01000052
243671
Actinomycetota
CTC
Glu
>WENV180454540
OBXN01000052
338148
Actinomycetota
CTG
Gln
>WENV180454627
OBXN01000185
235148
Actinomycetota
GTT
Asn
>WENV180454620
OBXN01000174
235148
Actinomycetota
GTT
Asn
>WENV180454619
OBXN01000174
235148
Actinomycetota
GTT
Asn
>WENV180454561
OBXN01000065
144825
Actinomycetota
CAT
Met
>WENV180454525
OBXN01000041
235348
Actinomycetota
CCT
Arg
>WENV180454532
OBXN01000048
113601
Actinomycetota
TAG
Leu
>WENV180454473
OBXN01000008
144595
Actinomycetota
CAA
Leu
>WENV180454471
OBXN01000008
163764
Actinomycetota
TGG
Pro
>WENV180454531
OBXN01000048
235121
Actinomycetota
CGT
Thr
>WENV180454538
OBXN01000052
47164
Actinomycetota
GGA
Ser
>WENV180454592
OBXN01000093
17009
Actinomycetota
GAG
Leu
>WENV180454647
OBXN01000296
80622
Actinomycetota
CAG
Leu
>WENV180454560
OBXN01000065
147734
Actinomycetota
GTC
Asp
>WENV180454559
OBXN01000065
147734
Actinomycetota
GTC
Asp
>WENV180454626
OBXN01000185
243162
Actinomycetota
GTT
Asn
>WENV180454514
OBXN01000033
144660
Actinomycetota
TAC
Val
>WENV180454579
OBXN01000082
95593
Actinomycetota
>WENV180454484
OBXN01000012
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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