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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180477441
OBYZ01000811
119661
Verrucomicrobiota
CAA
Leu
>WENV180477340
OBYZ01000504
155256
Verrucomicrobiota
TCT
Arg
>WENV180477381
OBYZ01000565
246701
Verrucomicrobiota
TTT
Lys
>WENV180476820
OBYZ01000009
345141
Verrucomicrobiota
TTG
Gln
>WENV180476914
OBYZ01000056
345133
Verrucomicrobiota
GAC
Val
>WENV180476937
OBYZ01000068
82054
Verrucomicrobiota
GTA
Tyr
>WENV180477129
OBYZ01000222
246677
Verrucomicrobiota
CTT
Lys
>WENV180477128
OBYZ01000222
246677
Verrucomicrobiota
CTT
Lys
>WENV180476885
OBYZ01000031
344844
Verrucomicrobiota
GCA
Cys
>WENV180476904
OBYZ01000049
155264
Verrucomicrobiota
GGG
Pro
>WENV180476821
OBYZ01000009
344845
Verrucomicrobiota
CTG
Gln
>WENV180477393
OBYZ01000610
128202
Verrucomicrobiota
GTC
Asp
>WENV180476817
OBYZ01000009
128202
Verrucomicrobiota
GTC
Asp
>WENV180477404
OBYZ01000665
414625
Verrucomicrobiota
CCC
Gly
>WENV180477110
OBYZ01000204
46246
Verrucomicrobiota
TGA
Ser
>WENV180477241
OBYZ01000353
97755
Verrucomicrobiota
TAG
Leu
>WENV180476886
OBYZ01000031
246700
Verrucomicrobiota
TTC
Glu
>WENV180476881
OBYZ01000031
246700
Verrucomicrobiota
TTC
Glu
>WENV180477068
OBYZ01000157
246687
Verrucomicrobiota
CGC
Ala
>WENV180476819
OBYZ01000009
344841
Verrucomicrobiota
CAC
Val
>WENV180477106
OBYZ01000198
60880
Verrucomicrobiota
CAG
Leu
>WENV180477163
OBYZ01000247
82056
Verrucomicrobiota
TAA
Leu
>WENV180477127
OBYZ01000222
344842
Verrucomicrobiota
CGT
Thr
>WENV180477320
OBYZ01000456
170105
Verrucomicrobiota
CAT
Met
>WENV180477279
OBYZ01000396
287733
Verrucomicrobiota
CCA
Trp
>WENV180477067
OBYZ01000157
345123
Verrucomicrobiota
TGT
Thr
>WENV180477109
OBYZ01000203
345110
Verrucomicrobiota
CCT
Arg
>WENV180476882
OBYZ01000031
344839
Verrucomicrobiota
GTG
His
>WENV180477084
OBYZ01000169
7274
Verrucomicrobiota
CGA
Ser
>WENV180477164
OBYZ01000247
246260
Verrucomicrobiota
>WENV180477130
OBYZ01000222
155268
Verrucomicrobiota
CGG
Pro
>WENV180476902
OBYZ01000049
246728
Verrucomicrobiota
GAA
Phe
>WENV180477165
OBYZ01000247
7256
Verrucomicrobiota
GCT
Ser
>WENV180477085
OBYZ01000172
345115
Verrucomicrobiota
CAT
Met
>WENV180477050
OBYZ01000137
345119
Verrucomicrobiota
TAC
Val
>WENV180476936
OBYZ01000068
345124
Verrucomicrobiota
GTT
Asn
>WENV180477252
OBYZ01000363
368497
Verrucomicrobiota
GCC
Gly
>WENV180476880
OBYZ01000031
368497
Verrucomicrobiota
GCC
Gly
>WENV180477377
OBYZ01000550
345142
Verrucomicrobiota
CCG
Arg
>WENV180476883
OBYZ01000031
246709
Verrucomicrobiota
CAT
Met
>WENV180476903
OBYZ01000049
154693
Verrucomicrobiota
TGG
Pro
>WENV180477278
OBYZ01000396
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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