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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180487230
OBZO01000064
243647
Bacillota
TTT
Lys
>WENV180487346
OBZO01000270
243647
Bacillota
TTT
Lys
>WENV180487289
OBZO01000105
16842
Bacillota
CGA
Ser
>WENV180487329
OBZO01000202
235693
Bacillota
GGT
Thr
>WENV180487385
OBZO01000715
411591
Bacillota
GGT
Thr
>WENV180487113
OBZO01000004
16834
Bacillota
GCT
Ser
>WENV180487107
OBZO01000001
114002
Bacillota
CAA
Leu
>WENV180487174
OBZO01000028
114002
Bacillota
CAA
Leu
>WENV180487173
OBZO01000025
37437
Bacillota
TAA
Leu
>WENV180487333
OBZO01000202
243612
Bacillota
TAC
Val
>WENV180487236
OBZO01000064
243612
Bacillota
TAC
Val
>WENV180487232
OBZO01000064
243612
Bacillota
TAC
Val
>WENV180487272
OBZO01000092
147135
Bacillota
ACG
Arg
>WENV180487106
OBZO01000001
342895
Bacillota
CAT
Met
>WENV180487410
OBZO01002215
254697
Bacillota
TTT
Lys
>WENV180487407
OBZO01001606
241471
Bacillota
TGC
Ala
>WENV180487246
OBZO01000070
250349
Bacillota
GAA
Phe
>WENV180487170
OBZO01000025
250349
Bacillota
GAA
Phe
>WENV180487416
OBZO01004079
235701
Bacillota
TTT
Lys
>WENV180487245
OBZO01000070
235197
Bacillota
GTC
Asp
>WENV180487169
OBZO01000025
235197
Bacillota
GTC
Asp
>WENV180487344
OBZO01000270
243613
Bacillota
GTG
His
>WENV180487330
OBZO01000202
152491
Bacillota
CAT
Met
>WENV180487191
OBZO01000040
413657
Bacillota
CCC
Gly
>WENV180487345
OBZO01000270
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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