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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180527315
OCHJ01000046
119661
Verrucomicrobiota
CAA
Leu
>WENV180527220
OCHJ01000018
155256
Verrucomicrobiota
TCT
Arg
>WENV180527830
OCHJ01000626
246701
Verrucomicrobiota
TTT
Lys
>WENV180527372
OCHJ01000085
345141
Verrucomicrobiota
TTG
Gln
>WENV180527374
OCHJ01000085
345133
Verrucomicrobiota
GAC
Val
>WENV180527715
OCHJ01000419
82054
Verrucomicrobiota
GTA
Tyr
>WENV180527530
OCHJ01000201
246677
Verrucomicrobiota
CTT
Lys
>WENV180527529
OCHJ01000201
246677
Verrucomicrobiota
CTT
Lys
>WENV180528300
OCHJ01002589
344844
Verrucomicrobiota
GCA
Cys
>WENV180527613
OCHJ01000279
155264
Verrucomicrobiota
GGG
Pro
>WENV180527373
OCHJ01000085
344845
Verrucomicrobiota
CTG
Gln
>WENV180527423
OCHJ01000122
128202
Verrucomicrobiota
GTC
Asp
>WENV180527371
OCHJ01000085
128202
Verrucomicrobiota
GTC
Asp
>WENV180527614
OCHJ01000279
414625
Verrucomicrobiota
CCC
Gly
>WENV180527340
OCHJ01000063
46246
Verrucomicrobiota
TGA
Ser
>WENV180527316
OCHJ01000046
97755
Verrucomicrobiota
TAG
Leu
>WENV180528037
OCHJ01001144
246700
Verrucomicrobiota
TTC
Glu
>WENV180528589
OCHJ01008982
347038
Verrucomicrobiota
GCC
Gly
>WENV180527518
OCHJ01000196
246687
Verrucomicrobiota
CGC
Ala
>WENV180527615
OCHJ01000279
419909
Verrucomicrobiota
TCC
Gly
>WENV180527822
OCHJ01000612
344841
Verrucomicrobiota
CAC
Val
>WENV180527587
OCHJ01000246
60880
Verrucomicrobiota
CAG
Leu
>WENV180527904
OCHJ01000795
82056
Verrucomicrobiota
TAA
Leu
>WENV180527528
OCHJ01000201
344842
Verrucomicrobiota
CGT
Thr
>WENV180527497
OCHJ01000175
170105
Verrucomicrobiota
CAT
Met
>WENV180527517
OCHJ01000196
345123
Verrucomicrobiota
TGT
Thr
>WENV180527314
OCHJ01000046
345110
Verrucomicrobiota
CCT
Arg
>WENV180528038
OCHJ01001144
344839
Verrucomicrobiota
GTG
His
>WENV180527832
OCHJ01000630
7274
Verrucomicrobiota
CGA
Ser
>WENV180527905
OCHJ01000795
246260
Verrucomicrobiota
>WENV180527531
OCHJ01000201
155268
Verrucomicrobiota
CGG
Pro
>WENV180527870
OCHJ01000712
82181
Verrucomicrobiota
AAG
Leu
>WENV180527616
OCHJ01000279
246728
Verrucomicrobiota
GAA
Phe
>WENV180527906
OCHJ01000795
7256
Verrucomicrobiota
GCT
Ser
>WENV180527339
OCHJ01000063
345115
Verrucomicrobiota
CAT
Met
>WENV180527370
OCHJ01000085
345119
Verrucomicrobiota
TAC
Val
>WENV180527589
OCHJ01000248
345124
Verrucomicrobiota
GTT
Asn
>WENV180527424
OCHJ01000122
17023
Verrucomicrobiota
GGA
Ser
>WENV180528120
OCHJ01001503
345142
Verrucomicrobiota
CCG
Arg
>WENV180528039
OCHJ01001144
246709
Verrucomicrobiota
CAT
Met
>WENV180527617
OCHJ01000279
154693
Verrucomicrobiota
TGG
Pro
>WENV180527435
OCHJ01000137
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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