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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180566653
OCLK01011117
144589
Actinomycetota
ACG
Arg
>WENV180566717
OCLK01030022
245301
Actinomycetota
GCC
Gly
>WENV180566681
OCLK01015072
153948
Actinomycetota
GGG
Pro
>WENV180566665
OCLK01012535
44862
Actinomycetota
CGA
Ser
>WENV180566704
OCLK01023104
254857
Actinomycetota
CCG
Arg
>WENV180566731
OCLK01040520
16223
Actinomycetota
GAG
Leu
>WENV180566725
OCLK01038828
144636
Actinomycetota
GAT
Ile
>WENV180566780
OCLK01075196
98279
Actinomycetota
GTA
Tyr
>WENV180566750
OCLK01051868
338148
Actinomycetota
CTG
Gln
>WENV180566787
OCLK01082659
235148
Actinomycetota
GTT
Asn
>WENV180566698
OCLK01019434
53078
Actinomycetota
GGA
Ser
>WENV180566773
OCLK01065172
145347
Actinomycetota
CAA
Leu
>WENV180566621
OCLK01004370
411554
Actinomycetota
CCC
Gly
>WENV180566605
OCLK01003167
235149
Actinomycetota
CCT
Arg
>WENV180566746
OCLK01050798
145269
Actinomycetota
CAT
Met
>WENV180566722
OCLK01035369
235121
Actinomycetota
CGT
Thr
>WENV180566620
OCLK01004368
144635
Actinomycetota
TGG
Pro
>WENV180566732
OCLK01040891
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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