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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180582578
OCMR01014515
199859
Gammaproteobacteria
CAT
Met
>WENV180582877
OCMR01110263
236480
Gammaproteobacteria
GTG
His
>WENV180582644
OCMR01032965
290337
Gammaproteobacteria
TAC
Val
>WENV180582957
OCMR01136688
236013
Gammaproteobacteria
TGC
Ala
>WENV180582826
OCMR01093243
147053
Gammaproteobacteria
GTT
Asn
>WENV180582731
OCMR01062173
149036
Gammaproteobacteria
CCA
Trp
>WENV180583031
OCMR01165016
238511
Gammaproteobacteria
TTT
Lys
>WENV180582568
OCMR01012025
59155
Gammaproteobacteria
TAA
Leu
>WENV180582878
OCMR01110263
97031
Gammaproteobacteria
TAG
Leu
>WENV180582505
OCMR01001865
269152
Gammaproteobacteria
GTG
His
>WENV180582566
OCMR01012025
237708
Gammaproteobacteria
GCC
Gly
>WENV180582567
OCMR01012025
412217
Gammaproteobacteria
GCA
Cys
>WENV180582622
OCMR01028215
237713
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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