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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593861
OCOY01000920
146662
Gammaproteobacteria
GAC
Val
>WENV180594132
OCOY01054321
238370
Gammaproteobacteria
TTT
Lys
>WENV180593897
OCOY01002410
237766
Gammaproteobacteria
TAC
Val
>WENV180593916
OCOY01003303
147053
Gammaproteobacteria
GTT
Asn
>WENV180593857
OCOY01000721
237980
Gammaproteobacteria
GAA
Phe
>WENV180593843
OCOY01000513
412799
Gammaproteobacteria
GCA
Cys
>WENV180593830
OCOY01000240
243895
Gammaproteobacteria
>WENV180593892
OCOY01002196
412476
Gammaproteobacteria
TCC
Gly
>WENV180594033
OCOY01016100
145713
Gammaproteobacteria
CAT
Met
>WENV180593905
OCOY01002605
238433
Gammaproteobacteria
TTC
Glu
>WENV180594162
OCOY01071924
154796
Gammaproteobacteria
TCT
Arg
>WENV180593890
OCOY01002196
237421
Gammaproteobacteria
TGT
Thr
>WENV180593928
OCOY01004326
16840
Gammaproteobacteria
GGA
Ser
>WENV180593844
OCOY01000513
59979
Gammaproteobacteria
TAA
Leu
>WENV180594169
OCOY01074939
59961
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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