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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180599993
OCPP01016764
119661
Verrucomicrobiota
CAA
Leu
>WENV180599685
OCPP01003494
155256
Verrucomicrobiota
TCT
Arg
>WENV180599969
OCPP01013227
246701
Verrucomicrobiota
TTT
Lys
>WENV180599826
OCPP01006412
345141
Verrucomicrobiota
TTG
Gln
>WENV180599498
OCPP01001338
345133
Verrucomicrobiota
GAC
Val
>WENV180599375
OCPP01000688
82054
Verrucomicrobiota
GTA
Tyr
>WENV180600251
OCPP01082244
246677
Verrucomicrobiota
CTT
Lys
>WENV180599702
OCPP01003671
155264
Verrucomicrobiota
GGG
Pro
>WENV180600153
OCPP01036862
344845
Verrucomicrobiota
CTG
Gln
>WENV180599832
OCPP01006504
128202
Verrucomicrobiota
GTC
Asp
>WENV180600099
OCPP01026932
414625
Verrucomicrobiota
CCC
Gly
>WENV180600123
OCPP01030231
46246
Verrucomicrobiota
TGA
Ser
>WENV180599810
OCPP01006195
97755
Verrucomicrobiota
TAG
Leu
>WENV180599747
OCPP01004393
246700
Verrucomicrobiota
TTC
Glu
>WENV180599844
OCPP01006914
246687
Verrucomicrobiota
CGC
Ala
>WENV180600098
OCPP01026932
419909
Verrucomicrobiota
TCC
Gly
>WENV180599974
OCPP01014080
344841
Verrucomicrobiota
CAC
Val
>WENV180600031
OCPP01020608
82056
Verrucomicrobiota
TAA
Leu
>WENV180599972
OCPP01013845
344842
Verrucomicrobiota
CGT
Thr
>WENV180599756
OCPP01004559
170105
Verrucomicrobiota
CAT
Met
>WENV180599815
OCPP01006265
287733
Verrucomicrobiota
CCA
Trp
>WENV180599593
OCPP01002198
345123
Verrucomicrobiota
TGT
Thr
>WENV180599741
OCPP01004278
345110
Verrucomicrobiota
CCT
Arg
>WENV180599768
OCPP01004976
344839
Verrucomicrobiota
GTG
His
>WENV180599866
OCPP01007676
246260
Verrucomicrobiota
>WENV180599649
OCPP01002780
155268
Verrucomicrobiota
CGG
Pro
>WENV180599785
OCPP01005466
246728
Verrucomicrobiota
GAA
Phe
>WENV180599793
OCPP01005623
7256
Verrucomicrobiota
GCT
Ser
>WENV180599902
OCPP01009684
345115
Verrucomicrobiota
CAT
Met
>WENV180599952
OCPP01012592
345124
Verrucomicrobiota
GTT
Asn
>WENV180599354
OCPP01000607
17023
Verrucomicrobiota
GGA
Ser
>WENV180600160
OCPP01039987
368497
Verrucomicrobiota
GCC
Gly
>WENV180599880
OCPP01008118
345142
Verrucomicrobiota
CCG
Arg
>WENV180599769
OCPP01004976
246709
Verrucomicrobiota
CAT
Met
>WENV180599786
OCPP01005466
154693
Verrucomicrobiota
TGG
Pro
>WENV180599591
OCPP01002177
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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