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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180715294
ODFW01004787
119661
Verrucomicrobiota
CAA
Leu
>WENV180715005
ODFW01001826
155256
Verrucomicrobiota
TCT
Arg
>WENV180715141
ODFW01002668
246701
Verrucomicrobiota
TTT
Lys
>WENV180715020
ODFW01001925
345141
Verrucomicrobiota
TTG
Gln
>WENV180715206
ODFW01003230
345133
Verrucomicrobiota
GAC
Val
>WENV180715314
ODFW01005241
82054
Verrucomicrobiota
GTA
Tyr
>WENV180715051
ODFW01002070
246677
Verrucomicrobiota
CTT
Lys
>WENV180715050
ODFW01002070
246677
Verrucomicrobiota
CTT
Lys
>WENV180715233
ODFW01003682
344844
Verrucomicrobiota
GCA
Cys
>WENV180714937
ODFW01001418
155264
Verrucomicrobiota
GGG
Pro
>WENV180715445
ODFW01008760
344845
Verrucomicrobiota
CTG
Gln
>WENV180715258
ODFW01004211
128202
Verrucomicrobiota
GTC
Asp
>WENV180715058
ODFW01002123
414625
Verrucomicrobiota
CCC
Gly
>WENV180715657
ODFW01025263
46246
Verrucomicrobiota
TGA
Ser
>WENV180714976
ODFW01001658
97755
Verrucomicrobiota
TAG
Leu
>WENV180715132
ODFW01002571
246700
Verrucomicrobiota
TTC
Glu
>WENV180715008
ODFW01001864
246700
Verrucomicrobiota
TTC
Glu
>WENV180715007
ODFW01001864
246700
Verrucomicrobiota
TTC
Glu
>WENV180715098
ODFW01002348
246687
Verrucomicrobiota
CGC
Ala
>WENV180715059
ODFW01002123
419909
Verrucomicrobiota
TCC
Gly
>WENV180714857
ODFW01001076
344841
Verrucomicrobiota
CAC
Val
>WENV180715302
ODFW01005020
60880
Verrucomicrobiota
CAG
Leu
>WENV180714877
ODFW01001121
82056
Verrucomicrobiota
TAA
Leu
>WENV180715049
ODFW01002070
344842
Verrucomicrobiota
CGT
Thr
>WENV180715002
ODFW01001818
170105
Verrucomicrobiota
CAT
Met
>WENV180715582
ODFW01016297
345123
Verrucomicrobiota
TGT
Thr
>WENV180715406
ODFW01007502
345110
Verrucomicrobiota
CCT
Arg
>WENV180715252
ODFW01003925
344839
Verrucomicrobiota
GTG
His
>WENV180714701
ODFW01000544
7274
Verrucomicrobiota
CGA
Ser
>WENV180714878
ODFW01001121
246260
Verrucomicrobiota
>WENV180715043
ODFW01002034
155268
Verrucomicrobiota
CGG
Pro
>WENV180714709
ODFW01000559
82181
Verrucomicrobiota
AAG
Leu
>WENV180715171
ODFW01002915
246728
Verrucomicrobiota
GAA
Phe
>WENV180714879
ODFW01001121
7256
Verrucomicrobiota
GCT
Ser
>WENV180715370
ODFW01006690
345115
Verrucomicrobiota
CAT
Met
>WENV180715286
ODFW01004652
345119
Verrucomicrobiota
TAC
Val
>WENV180715327
ODFW01005491
345124
Verrucomicrobiota
GTT
Asn
>WENV180714554
ODFW01000254
17023
Verrucomicrobiota
GGA
Ser
>WENV180715522
ODFW01011904
368497
Verrucomicrobiota
GCC
Gly
>WENV180715263
ODFW01004223
368497
Verrucomicrobiota
GCC
Gly
>WENV180715277
ODFW01004555
345142
Verrucomicrobiota
CCG
Arg
>WENV180715253
ODFW01003925
246709
Verrucomicrobiota
CAT
Met
>WENV180715172
ODFW01002915
154693
Verrucomicrobiota
TGG
Pro
>WENV180714806
ODFW01000854
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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