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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180745900
ODHM01000055
81880
Gammaproteobacteria
GAG
Leu
>WENV180746320
ODHM01060921
246818
Gammaproteobacteria
TTT
Lys
>WENV180745887
ODHM01000014
30640
Gammaproteobacteria
GGA
Ser
>WENV180745897
ODHM01000043
424364
Gammaproteobacteria
CCA
Trp
>WENV180745966
ODHM01000484
3276
Gammaproteobacteria
>WENV180746048
ODHM01001867
3276
Gammaproteobacteria
>WENV180746113
ODHM01005941
80672
Gammaproteobacteria
GAG
Leu
>WENV180746248
ODHM01029069
145168
Gammaproteobacteria
CAT
Met
>WENV180746033
ODHM01001355
3972
Gammaproteobacteria
GCT
Ser
>WENV180745982
ODHM01000519
254333
Gammaproteobacteria
TGT
Thr
>WENV180746187
ODHM01015134
58828
Gammaproteobacteria
TAA
Leu
>WENV180745917
ODHM01000101
146713
Gammaproteobacteria
GAC
Val
>WENV180746051
ODHM01001908
268376
Gammaproteobacteria
CTT
Lys
>WENV180745983
ODHM01000532
268376
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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