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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180830964
ODKB01022771
81880
Gammaproteobacteria
GAG
Leu
>WENV180831475
ODKB01226853
338478
Gammaproteobacteria
TTG
Gln
>WENV180830634
ODKB01007764
3276
Gammaproteobacteria
>WENV180831313
ODKB01089150
145168
Gammaproteobacteria
CAT
Met
>WENV180831378
ODKB01130514
145168
Gammaproteobacteria
CAT
Met
>WENV180831031
ODKB01030348
23665
Gammaproteobacteria
>WENV180830624
ODKB01007478
147761
Gammaproteobacteria
TGG
Pro
>WENV180830629
ODKB01007563
147761
Gammaproteobacteria
TGG
Pro
>WENV180830617
ODKB01007263
152293
Gammaproteobacteria
ACG
Arg
>WENV180831115
ODKB01039603
147499
Gammaproteobacteria
CTT
Lys
>WENV180831405
ODKB01147584
237306
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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