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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180852958
ODKW01013970
81880
Gammaproteobacteria
GAG
Leu
>WENV180853233
ODKW01047168
81880
Gammaproteobacteria
GAG
Leu
>WENV180852810
ODKW01006707
7543
Gammaproteobacteria
GCT
Ser
>WENV180852912
ODKW01011345
3276
Gammaproteobacteria
>WENV180852871
ODKW01008922
80672
Gammaproteobacteria
GAG
Leu
>WENV180852679
ODKW01003414
235793
Gammaproteobacteria
CAT
Met
>WENV180852607
ODKW01002422
3247
Gammaproteobacteria
GCT
Ser
>WENV180853300
ODKW01063936
58828
Gammaproteobacteria
TAA
Leu
>WENV180852834
ODKW01007545
3278
Gammaproteobacteria
>WENV180852769
ODKW01005661
147761
Gammaproteobacteria
TGG
Pro
>WENV180852456
ODKW01001128
147761
Gammaproteobacteria
TGG
Pro
>WENV180852746
ODKW01005022
152293
Gammaproteobacteria
ACG
Arg
>WENV180852979
ODKW01014824
97795
Gammaproteobacteria
GTA
Tyr
>WENV180853333
ODKW01072962
147499
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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