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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180877792
ODLV01002678
314498
Actinomycetota
GGC
Ala
>WENV180878137
ODLV01016819
314498
Actinomycetota
GGC
Ala
>WENV180878386
ODLV01052489
241401
Actinomycetota
CCA
Trp
>WENV180877827
ODLV01003112
440908
Actinomycetota
GCA
Cys
>WENV180878277
ODLV01031633
150473
Actinomycetota
CTC
Glu
>WENV180878492
ODLV01099928
149271
Actinomycetota
CAT
Met
>WENV180878176
ODLV01020589
239204
Actinomycetota
CTT
Lys
>WENV180878055
ODLV01010316
392594
Actinomycetota
GAC
Val
>WENV180877825
ODLV01003112
392594
Actinomycetota
GAC
Val
>WENV180877674
ODLV01001083
148467
Actinomycetota
CAT
Met
>WENV180878007
ODLV01009051
246299
Actinomycetota
CTT
Lys
>WENV180878006
ODLV01009051
246299
Actinomycetota
CTT
Lys
>WENV180878172
ODLV01019353
246222
Actinomycetota
CCG
Arg
>WENV180878241
ODLV01028609
152190
Actinomycetota
GAT
Ile
>WENV180877883
ODLV01004451
162402
Actinomycetota
GGG
Pro
>WENV180877548
ODLV01000303
293092
Actinomycetota
CTC
Glu
>WENV180878002
ODLV01008998
59716
Actinomycetota
CAG
Leu
>WENV180878337
ODLV01040994
377770
Actinomycetota
CTG
Gln
>WENV180877828
ODLV01003112
388111
Actinomycetota
>WENV180877859
ODLV01003787
412870
Actinomycetota
TCC
Gly
>WENV180878467
ODLV01087025
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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