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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180882087
ODMB01008795
151860
Fusobacteriota
ACG
Arg
>WENV180882050
ODMB01006525
151857
Fusobacteriota
TCT
Arg
>WENV180882060
ODMB01006525
156827
Fusobacteriota
GTC
Asp
>WENV180882154
ODMB01024634
115931
Fusobacteriota
TAG
Leu
>WENV180882086
ODMB01008795
155082
Fusobacteriota
TCG
Arg
>WENV180882088
ODMB01008795
60218
Fusobacteriota
CAA
Leu
>WENV180882256
ODMB01078685
296648
Fusobacteriota
GTG
His
>WENV180882057
ODMB01006525
242891
Fusobacteriota
CTT
Lys
>WENV180882156
ODMB01024634
151855
Fusobacteriota
TGC
Ala
>WENV180882051
ODMB01006525
127801
Fusobacteriota
CAT
Met
>WENV180882153
ODMB01024634
248546
Fusobacteriota
TTT
Lys
>WENV180882058
ODMB01006525
377837
Fusobacteriota
TTC
Glu
>WENV180882052
ODMB01006525
377837
Fusobacteriota
TTC
Glu
>WENV180882055
ODMB01006525
415120
Fusobacteriota
GCA
Cys
>WENV180882053
ODMB01006525
113955
Fusobacteriota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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