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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180890538
ODMO01004246
242888
Fusobacteriota
GTT
Asn
>WENV180890559
ODMO01004950
151858
Fusobacteriota
GAT
Ile
>WENV180891074
ODMO01048671
151860
Fusobacteriota
ACG
Arg
>WENV180891038
ODMO01039096
156827
Fusobacteriota
GTC
Asp
>WENV180890914
ODMO01024564
115931
Fusobacteriota
TAG
Leu
>WENV180890676
ODMO01008395
152483
Fusobacteriota
GTC
Asp
>WENV180890763
ODMO01013481
152483
Fusobacteriota
GTC
Asp
>WENV180891183
ODMO01080395
246241
Fusobacteriota
TGC
Ala
>WENV180890713
ODMO01010705
248600
Fusobacteriota
GTG
His
>WENV180891126
ODMO01058272
343015
Fusobacteriota
TTG
Gln
>WENV180891039
ODMO01039096
242889
Fusobacteriota
TGT
Thr
>WENV180891075
ODMO01048671
60218
Fusobacteriota
CAA
Leu
>WENV180890912
ODMO01024564
296648
Fusobacteriota
GTG
His
>WENV180891035
ODMO01039096
242891
Fusobacteriota
CTT
Lys
>WENV180890560
ODMO01004950
151855
Fusobacteriota
TGC
Ala
>WENV180890714
ODMO01010705
243606
Fusobacteriota
TTT
Lys
>WENV180890881
ODMO01021932
152485
Fusobacteriota
TCT
Arg
>WENV180890915
ODMO01024564
390517
Fusobacteriota
TTG
Gln
>WENV180890913
ODMO01024564
248546
Fusobacteriota
TTT
Lys
>WENV180891036
ODMO01039096
377837
Fusobacteriota
TTC
Glu
>WENV180890561
ODMO01004950
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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