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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180935808
ODTU01000670
119661
Verrucomicrobiota
CAA
Leu
>WENV180935577
ODTU01000200
155256
Verrucomicrobiota
TCT
Arg
>WENV180935483
ODTU01000101
246701
Verrucomicrobiota
TTT
Lys
>WENV180935445
ODTU01000076
345141
Verrucomicrobiota
TTG
Gln
>WENV180935598
ODTU01000236
345133
Verrucomicrobiota
GAC
Val
>WENV180935502
ODTU01000115
82054
Verrucomicrobiota
GTA
Tyr
>WENV180935644
ODTU01000306
246677
Verrucomicrobiota
CTT
Lys
>WENV180935643
ODTU01000306
246677
Verrucomicrobiota
CTT
Lys
>WENV180936215
ODTU01002833
344844
Verrucomicrobiota
GCA
Cys
>WENV180935613
ODTU01000269
155264
Verrucomicrobiota
GGG
Pro
>WENV180935788
ODTU01000627
344845
Verrucomicrobiota
CTG
Gln
>WENV180935821
ODTU01000706
128202
Verrucomicrobiota
GTC
Asp
>WENV180935789
ODTU01000627
128202
Verrucomicrobiota
GTC
Asp
>WENV180935484
ODTU01000104
414625
Verrucomicrobiota
CCC
Gly
>WENV180935638
ODTU01000301
46246
Verrucomicrobiota
TGA
Ser
>WENV180935829
ODTU01000744
97755
Verrucomicrobiota
TAG
Leu
>WENV180935776
ODTU01000606
246700
Verrucomicrobiota
TTC
Glu
>WENV180935595
ODTU01000228
246700
Verrucomicrobiota
TTC
Glu
>WENV180935594
ODTU01000228
246700
Verrucomicrobiota
TTC
Glu
>WENV180935828
ODTU01000738
246687
Verrucomicrobiota
CGC
Ala
>WENV180935486
ODTU01000104
419909
Verrucomicrobiota
TCC
Gly
>WENV180935841
ODTU01000772
344841
Verrucomicrobiota
CAC
Val
>WENV180935933
ODTU01001099
60880
Verrucomicrobiota
CAG
Leu
>WENV180935868
ODTU01000868
82056
Verrucomicrobiota
TAA
Leu
>WENV180935642
ODTU01000306
344842
Verrucomicrobiota
CGT
Thr
>WENV180935924
ODTU01001047
170105
Verrucomicrobiota
CAT
Met
>WENV180935596
ODTU01000228
345123
Verrucomicrobiota
TGT
Thr
>WENV180935436
ODTU01000064
345110
Verrucomicrobiota
CCT
Arg
>WENV180935777
ODTU01000606
344839
Verrucomicrobiota
GTG
His
>WENV180935570
ODTU01000184
7274
Verrucomicrobiota
CGA
Ser
>WENV180935869
ODTU01000868
246260
Verrucomicrobiota
>WENV180935641
ODTU01000306
155268
Verrucomicrobiota
CGG
Pro
>WENV180935578
ODTU01000201
82181
Verrucomicrobiota
AAG
Leu
>WENV180935614
ODTU01000269
246728
Verrucomicrobiota
GAA
Phe
>WENV180935870
ODTU01000868
7256
Verrucomicrobiota
GCT
Ser
>WENV180935639
ODTU01000301
345115
Verrucomicrobiota
CAT
Met
>WENV180935599
ODTU01000236
345119
Verrucomicrobiota
TAC
Val
>WENV180935501
ODTU01000115
345124
Verrucomicrobiota
GTT
Asn
>WENV180935646
ODTU01000308
17023
Verrucomicrobiota
GGA
Ser
>WENV180935775
ODTU01000606
368497
Verrucomicrobiota
GCC
Gly
>WENV180935704
ODTU01000416
368497
Verrucomicrobiota
GCC
Gly
>WENV180935485
ODTU01000104
345142
Verrucomicrobiota
CCG
Arg
>WENV180935778
ODTU01000606
246709
Verrucomicrobiota
CAT
Met
>WENV180935615
ODTU01000269
154693
Verrucomicrobiota
TGG
Pro
>WENV180935574
ODTU01000192
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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