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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181045474
ODXW01000274
413566
Actinomycetota
CCC
Gly
>WENV181045490
ODXW01000305
413566
Actinomycetota
CCC
Gly
>WENV181046584
ODXW01084337
361079
Actinomycetota
CTG
Gln
>WENV181045471
ODXW01000270
261773
Actinomycetota
CCT
Arg
>WENV181045955
ODXW01003932
158373
Actinomycetota
GGG
Pro
>WENV181046625
ODXW01101857
158373
Actinomycetota
GGG
Pro
>WENV181046253
ODXW01013943
418439
Actinomycetota
TCC
Gly
>WENV181046317
ODXW01019236
418439
Actinomycetota
TCC
Gly
>WENV181046301
ODXW01017398
161605
Actinomycetota
CAT
Met
>WENV181045669
ODXW01000966
241401
Actinomycetota
CCA
Trp
>WENV181046160
ODXW01010165
150473
Actinomycetota
CTC
Glu
>WENV181045754
ODXW01001452
149271
Actinomycetota
CAT
Met
>WENV181045706
ODXW01001168
246015
Actinomycetota
GTG
His
>WENV181046455
ODXW01038726
239204
Actinomycetota
CTT
Lys
>WENV181045767
ODXW01001496
239204
Actinomycetota
CTT
Lys
>WENV181046023
ODXW01005241
148467
Actinomycetota
CAT
Met
>WENV181046022
ODXW01005241
148467
Actinomycetota
CAT
Met
>WENV181046004
ODXW01004863
246299
Actinomycetota
CTT
Lys
>WENV181046003
ODXW01004863
246299
Actinomycetota
CTT
Lys
>WENV181046267
ODXW01014813
235388
Actinomycetota
GTG
His
>WENV181045370
ODXW01000128
246222
Actinomycetota
CCG
Arg
>WENV181045488
ODXW01000303
149270
Actinomycetota
GTC
Asp
>WENV181045615
ODXW01000744
152190
Actinomycetota
GAT
Ile
>WENV181046585
ODXW01084337
240121
Actinomycetota
CTC
Glu
>WENV181046617
ODXW01101418
162402
Actinomycetota
GGG
Pro
>WENV181045784
ODXW01001668
162402
Actinomycetota
GGG
Pro
>WENV181045744
ODXW01001424
162402
Actinomycetota
GGG
Pro
>WENV181045818
ODXW01001920
59716
Actinomycetota
CAG
Leu
>WENV181046517
ODXW01053859
246365
Actinomycetota
ACG
Arg
>WENV181045544
ODXW01000433
246365
Actinomycetota
ACG
Arg
>WENV181046125
ODXW01008194
97120
Actinomycetota
GTA
Tyr
>WENV181045916
ODXW01003025
97120
Actinomycetota
GTA
Tyr
>WENV181046535
ODXW01059472
240124
Actinomycetota
CGT
Thr
>WENV181046100
ODXW01006791
240124
Actinomycetota
CGT
Thr
>WENV181045546
ODXW01000442
240124
Actinomycetota
CGT
Thr
>WENV181046445
ODXW01037270
235575
Actinomycetota
CTC
Glu
>WENV181046391
ODXW01026669
236216
Actinomycetota
GGC
Ala
>WENV181046343
ODXW01023137
236216
Actinomycetota
GGC
Ala
>WENV181046312
ODXW01018226
236216
Actinomycetota
GGC
Ala
>WENV181046083
ODXW01006516
236216
Actinomycetota
GGC
Ala
>WENV181045926
ODXW01003280
236216
Actinomycetota
GGC
Ala
>WENV181045921
ODXW01003174
236216
Actinomycetota
GGC
Ala
>WENV181045892
ODXW01002687
236216
Actinomycetota
GGC
Ala
>WENV181046099
ODXW01006782
344380
Actinomycetota
GAC
Val
>WENV181045337
ODXW01000084
412870
Actinomycetota
TCC
Gly
>WENV181045821
ODXW01001923
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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