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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181088191
OEBA01000556
119661
Verrucomicrobiota
CAA
Leu
>WENV181088357
OEBA01001152
155256
Verrucomicrobiota
TCT
Arg
>WENV181088519
OEBA01002096
246701
Verrucomicrobiota
TTT
Lys
>WENV181088208
OEBA01000617
345141
Verrucomicrobiota
TTG
Gln
>WENV181088951
OEBA01008291
345133
Verrucomicrobiota
GAC
Val
>WENV181088049
OEBA01000247
82054
Verrucomicrobiota
GTA
Tyr
>WENV181088243
OEBA01000749
246677
Verrucomicrobiota
CTT
Lys
>WENV181088705
OEBA01003996
344844
Verrucomicrobiota
GCA
Cys
>WENV181088917
OEBA01007326
155264
Verrucomicrobiota
GGG
Pro
>WENV181088576
OEBA01002486
344845
Verrucomicrobiota
CTG
Gln
>WENV181089070
OEBA01011547
128202
Verrucomicrobiota
GTC
Asp
>WENV181088592
OEBA01002661
414625
Verrucomicrobiota
CCC
Gly
>WENV181089513
OEBA01038795
46246
Verrucomicrobiota
TGA
Ser
>WENV181088388
OEBA01001264
97755
Verrucomicrobiota
TAG
Leu
>WENV181088706
OEBA01003996
246700
Verrucomicrobiota
TTC
Glu
>WENV181088395
OEBA01001311
246700
Verrucomicrobiota
TTC
Glu
>WENV181088624
OEBA01002965
246687
Verrucomicrobiota
CGC
Ala
>WENV181088591
OEBA01002661
419909
Verrucomicrobiota
TCC
Gly
>WENV181088207
OEBA01000616
344841
Verrucomicrobiota
CAC
Val
>WENV181088777
OEBA01004940
60880
Verrucomicrobiota
CAG
Leu
>WENV181088268
OEBA01000868
82056
Verrucomicrobiota
TAA
Leu
>WENV181088242
OEBA01000749
344842
Verrucomicrobiota
CGT
Thr
>WENV181088182
OEBA01000517
170105
Verrucomicrobiota
CAT
Met
>WENV181088278
OEBA01000905
287733
Verrucomicrobiota
CCA
Trp
>WENV181088928
OEBA01007643
345123
Verrucomicrobiota
TGT
Thr
>WENV181088494
OEBA01001926
345110
Verrucomicrobiota
CCT
Arg
>WENV181088396
OEBA01001311
344839
Verrucomicrobiota
GTG
His
>WENV181088215
OEBA01000636
7274
Verrucomicrobiota
CGA
Ser
>WENV181088269
OEBA01000868
246260
Verrucomicrobiota
>WENV181088263
OEBA01000857
155268
Verrucomicrobiota
CGG
Pro
>WENV181088057
OEBA01000271
82181
Verrucomicrobiota
AAG
Leu
>WENV181088509
OEBA01002024
246728
Verrucomicrobiota
GAA
Phe
>WENV181088270
OEBA01000868
7256
Verrucomicrobiota
GCT
Ser
>WENV181088503
OEBA01001997
345115
Verrucomicrobiota
CAT
Met
>WENV181088237
OEBA01000699
345119
Verrucomicrobiota
TAC
Val
>WENV181088404
OEBA01001352
345124
Verrucomicrobiota
GTT
Asn
>WENV181088505
OEBA01001999
17023
Verrucomicrobiota
GGA
Ser
>WENV181089486
OEBA01035049
368497
Verrucomicrobiota
GCC
Gly
>WENV181088365
OEBA01001183
368497
Verrucomicrobiota
GCC
Gly
>WENV181089239
OEBA01017446
345142
Verrucomicrobiota
CCG
Arg
>WENV181088397
OEBA01001311
246709
Verrucomicrobiota
CAT
Met
>WENV181088510
OEBA01002024
154693
Verrucomicrobiota
TGG
Pro
>WENV181088277
OEBA01000905
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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