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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181101237
OECM01024745
147942
Bacteroidota
GTC
Asp
>WENV181101031
OECM01000485
119907
Bacteroidota
CAA
Leu
>WENV181101129
OECM01005341
99288
Bacteroidota
TAG
Leu
>WENV181101096
OECM01002963
344824
Bacteroidota
CCG
Arg
>WENV181100985
OECM01000189
128178
Bacteroidota
TAC
Val
>WENV181100986
OECM01000189
128178
Bacteroidota
TAC
Val
>WENV181101147
OECM01007554
246224
Bacteroidota
GGG
Pro
>WENV181101027
OECM01000424
145504
Bacteroidota
TGT
Thr
>WENV181100964
OECM01000077
145504
Bacteroidota
TGT
Thr
>WENV181101251
OECM01027659
412439
Bacteroidota
CCA
Trp
>WENV181101038
OECM01000566
191087
Bacteroidota
TCT
Arg
>WENV181101196
OECM01013307
147939
Bacteroidota
CAT
Met
>WENV181100959
OECM01000055
37794
Bacteroidota
TAA
Leu
>WENV181101026
OECM01000412
60822
Bacteroidota
GAG
Leu
>WENV181101111
OECM01003592
414526
Bacteroidota
GCA
Cys
>WENV181101159
OECM01008298
148247
Bacteroidota
TGC
Ala
>WENV181100996
OECM01000249
290994
Bacteroidota
CAT
Met
>WENV181101135
OECM01006013
235802
Bacteroidota
CAT
Met
>WENV181101079
OECM01001966
47173
Bacteroidota
TGA
Ser
>WENV181101328
OECM01079344
369111
Bacteroidota
TTC
Glu
>WENV181101200
OECM01014566
369111
Bacteroidota
TTC
Glu
>WENV181101056
OECM01001261
95954
Bacteroidota
TAG
Leu
>WENV181101260
OECM01032073
244299
Bacteroidota
CGG
Pro
>WENV181101035
OECM01000523
147945
Bacteroidota
CAT
Met
>WENV181101017
OECM01000315
159335
Bacteroidota
GTT
Asn
>WENV181100958
OECM01000055
239856
Bacteroidota
GCC
Gly
>WENV181101036
OECM01000566
59413
Bacteroidota
GCT
Ser
>WENV181101024
OECM01000412
242581
Bacteroidota
TTT
Lys
>WENV181101083
OECM01002125
154850
Bacteroidota
CAT
Met
>WENV181100987
OECM01000202
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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