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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181120150
OEFJ01007318
235615
Actinomycetota
TGC
Ala
>WENV181120383
OEFJ01065826
413566
Actinomycetota
CCC
Gly
>WENV181120196
OEFJ01009845
240126
Actinomycetota
GTG
His
>WENV181120036
OEFJ01002554
37831
Actinomycetota
GGA
Ser
>WENV181120261
OEFJ01015748
235606
Actinomycetota
GGT
Thr
>WENV181120302
OEFJ01021846
246840
Actinomycetota
CAC
Val
>WENV181120191
OEFJ01009372
340959
Actinomycetota
GTT
Asn
>WENV181120286
OEFJ01019436
149272
Actinomycetota
TTT
Lys
>WENV181120153
OEFJ01007808
161605
Actinomycetota
CAT
Met
>WENV181120253
OEFJ01014174
145272
Actinomycetota
CAT
Met
>WENV181120161
OEFJ01008233
96367
Actinomycetota
GTA
Tyr
>WENV181120216
OEFJ01010869
341846
Actinomycetota
TCC
Gly
>WENV181120238
OEFJ01013614
235610
Actinomycetota
TGT
Thr
>WENV181120301
OEFJ01021846
412871
Actinomycetota
GCA
Cys
>WENV181120069
OEFJ01003839
338389
Actinomycetota
CAC
Val
>WENV181120352
OEFJ01038948
235663
Actinomycetota
TTT
Lys
>WENV181120349
OEFJ01035866
240122
Actinomycetota
TGT
Thr
>WENV181120149
OEFJ01007318
145052
Actinomycetota
GAT
Ile
>WENV181120262
OEFJ01015748
338474
Actinomycetota
CAT
Met
>WENV181120270
OEFJ01016580
16591
Actinomycetota
GAG
Leu
>WENV181120163
OEFJ01008233
149271
Actinomycetota
CAT
Met
>WENV181120198
OEFJ01009915
96366
Actinomycetota
TAG
Leu
>WENV181120325
OEFJ01025817
37093
Actinomycetota
GAG
Leu
>WENV181120236
OEFJ01013320
23975
Actinomycetota
GCT
Ser
>WENV181120244
OEFJ01013762
235384
Actinomycetota
GTG
His
>WENV181120263
OEFJ01015748
250703
Actinomycetota
CCA
Trp
>WENV181120146
OEFJ01007005
246299
Actinomycetota
CTT
Lys
>WENV181119967
OEFJ01001045
411740
Actinomycetota
CCC
Gly
>WENV181120086
OEFJ01004502
148463
Actinomycetota
TAA
Leu
>WENV181120246
OEFJ01013807
246222
Actinomycetota
CCG
Arg
>WENV181120112
OEFJ01005103
260823
Actinomycetota
TGC
Ala
>WENV181120377
OEFJ01062473
37359
Actinomycetota
>WENV181120372
OEFJ01058120
45767
Actinomycetota
GGA
Ser
>WENV181120317
OEFJ01023631
45767
Actinomycetota
GGA
Ser
>WENV181120111
OEFJ01005103
152190
Actinomycetota
GAT
Ile
>WENV181120273
OEFJ01017050
240121
Actinomycetota
CTC
Glu
>WENV181120332
OEFJ01029561
149269
Actinomycetota
TGG
Pro
>WENV181120039
OEFJ01002692
58781
Actinomycetota
CAG
Leu
>WENV181120331
OEFJ01029471
340958
Actinomycetota
TTG
Gln
>WENV181120364
OEFJ01056156
235613
Actinomycetota
GAA
Phe
>WENV181120173
OEFJ01008869
145085
Actinomycetota
CAA
Leu
>WENV181120233
OEFJ01013185
59716
Actinomycetota
CAG
Leu
>WENV181120287
OEFJ01019678
241612
Actinomycetota
CTT
Lys
>WENV181120382
OEFJ01065670
243424
Actinomycetota
TAC
Val
>WENV181120152
OEFJ01007757
235603
Actinomycetota
CCG
Arg
>WENV181120147
OEFJ01007086
37358
Actinomycetota
TGA
Ser
>WENV181120116
OEFJ01005236
240124
Actinomycetota
CGT
Thr
>WENV181120047
OEFJ01003026
240124
Actinomycetota
CGT
Thr
>WENV181120279
OEFJ01017661
3306
Actinomycetota
TAT
Ile
>WENV181120280
OEFJ01017661
96368
Actinomycetota
TAA
Leu
>WENV181120126
OEFJ01006257
236216
Actinomycetota
GGC
Ala
>WENV181120254
OEFJ01014181
154637
Actinomycetota
CAA
Leu
>WENV181120248
OEFJ01013821
239214
Actinomycetota
TTC
Glu
>WENV181120073
OEFJ01003939
16836
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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