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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181145620
OEHO01363988
146578
Alphaproteobacteria
CGG
Pro
>WENV181145100
OEHO01194228
155902
Alphaproteobacteria
GTG
His
>WENV181144600
OEHO01045472
375044
Alphaproteobacteria
GCC
Gly
>WENV181144895
OEHO01126863
352247
Alphaproteobacteria
TTG
Gln
>WENV181145264
OEHO01248140
377852
Alphaproteobacteria
TGT
Thr
>WENV181145484
OEHO01320787
377852
Alphaproteobacteria
TGT
Thr
>WENV181145608
OEHO01359089
5143
Alphaproteobacteria
GCT
Ser
>WENV181145582
OEHO01352878
342876
Alphaproteobacteria
GAC
Val
>WENV181145380
OEHO01286057
417658
Alphaproteobacteria
TCC
Gly
>WENV181145423
OEHO01296586
361238
Alphaproteobacteria
GCC
Gly
>WENV181144738
OEHO01076395
188632
Alphaproteobacteria
GAT
Ile
>WENV181145119
OEHO01201702
23611
Alphaproteobacteria
CGA
Ser
>WENV181144542
OEHO01035634
352138
Alphaproteobacteria
TTG
Gln
>WENV181145615
OEHO01363493
98812
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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