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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181144542
OEHO01035634
396032
Alphaproteobacteria
TTG
Gln
>WENV181145423
OEHO01296586
405332
Alphaproteobacteria
GCC
Gly
>WENV181145562
OEHO01346909
376060
Alphaproteobacteria
CGT
Thr
>WENV181145119
OEHO01201702
28713
Alphaproteobacteria
CGA
Ser
>WENV181145608
OEHO01359089
5399
Alphaproteobacteria
GCT
Ser
>WENV181145066
OEHO01177887
309182
Alphaproteobacteria
TAC
Val
>WENV181144895
OEHO01126863
403408
Alphaproteobacteria
TTG
Gln
>WENV181144984
OEHO01149938
318362
Alphaproteobacteria
CGC
Ala
>WENV181145100
OEHO01194228
178890
Alphaproteobacteria
GTG
His
>WENV181144946
OEHO01139871
323860
Alphaproteobacteria
CCA
Trp
>WENV181144738
OEHO01076395
232056
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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