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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181159293
OEIH01146484
16842
Bacillota
CGA
Ser
>WENV181158426
OEIH01001302
235693
Bacillota
GGT
Thr
>WENV181158610
OEIH01004193
16834
Bacillota
GCT
Ser
>WENV181158683
OEIH01005804
243646
Bacillota
GTT
Asn
>WENV181158724
OEIH01007666
243646
Bacillota
GTT
Asn
>WENV181158750
OEIH01008852
114002
Bacillota
CAA
Leu
>WENV181158632
OEIH01004394
37437
Bacillota
TAA
Leu
>WENV181158790
OEIH01009649
144763
Bacillota
TGG
Pro
>WENV181158788
OEIH01009649
144763
Bacillota
TGG
Pro
>WENV181159218
OEIH01101878
243612
Bacillota
TAC
Val
>WENV181158184
OEIH01000003
338676
Bacillota
CCG
Arg
>WENV181159294
OEIH01147070
147135
Bacillota
ACG
Arg
>WENV181159229
OEIH01109916
144599
Bacillota
GTC
Asp
>WENV181159233
OEIH01110718
242848
Bacillota
GAA
Phe
>WENV181159001
OEIH01027988
342895
Bacillota
CAT
Met
>WENV181159208
OEIH01097092
341777
Bacillota
TTC
Glu
>WENV181158832
OEIH01012561
341777
Bacillota
TTC
Glu
>WENV181159102
OEIH01047032
241471
Bacillota
TGC
Ala
>WENV181158543
OEIH01002663
235197
Bacillota
GTC
Asp
>WENV181159255
OEIH01120996
147183
Bacillota
GTT
Asn
>WENV181158795
OEIH01009859
243613
Bacillota
GTG
His
>WENV181158427
OEIH01001302
152491
Bacillota
CAT
Met
>WENV181158591
OEIH01003403
413657
Bacillota
CCC
Gly
>WENV181158796
OEIH01009859
343027
Bacillota
TTG
Gln
>WENV181159269
OEIH01130326
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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