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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181173851
OEJO01000346
235097
Bacteroidota
TTT
Lys
>WENV181173948
OEJO01002037
235102
Bacteroidota
CGT
Thr
>WENV181174051
OEJO01006339
144657
Bacteroidota
CGG
Pro
>WENV181174033
OEJO01005324
243025
Bacteroidota
CAT
Met
>WENV181174178
OEJO01031594
243025
Bacteroidota
CAT
Met
>WENV181174007
OEJO01004411
338155
Bacteroidota
CTC
Glu
>WENV181174208
OEJO01044478
338155
Bacteroidota
CTC
Glu
>WENV181174185
OEJO01035887
153993
Bacteroidota
GAT
Ile
>WENV181174152
OEJO01024535
339341
Bacteroidota
GGT
Thr
>WENV181173998
OEJO01003765
343138
Bacteroidota
CCT
Arg
>WENV181174046
OEJO01006082
58715
Bacteroidota
GAG
Leu
>WENV181174076
OEJO01008736
46165
Bacteroidota
TGA
Ser
>WENV181174086
OEJO01009369
338486
Bacteroidota
CAT
Met
>WENV181174070
OEJO01007968
338486
Bacteroidota
CAT
Met
>WENV181173996
OEJO01003464
338486
Bacteroidota
CAT
Met
>WENV181174020
OEJO01004542
48053
Bacteroidota
TGA
Ser
>WENV181173946
OEJO01001944
48053
Bacteroidota
TGA
Ser
>WENV181173938
OEJO01001743
48053
Bacteroidota
TGA
Ser
>WENV181173932
OEJO01001482
48053
Bacteroidota
TGA
Ser
>WENV181173915
OEJO01001139
48053
Bacteroidota
TGA
Ser
>WENV181173897
OEJO01000917
48053
Bacteroidota
TGA
Ser
>WENV181173817
OEJO01000080
415410
Bacteroidota
TTG
Gln
>WENV181174019
OEJO01004519
59689
Bacteroidota
CAG
Leu
>WENV181174231
OEJO01060729
344692
Bacteroidota
GGT
Thr
>WENV181174080
OEJO01008813
145504
Bacteroidota
TGT
Thr
>WENV181173849
OEJO01000295
338124
Bacteroidota
CCG
Arg
>WENV181173810
OEJO01000021
338124
Bacteroidota
CCG
Arg
>WENV181174075
OEJO01008736
238121
Bacteroidota
CTT
Lys
>WENV181174074
OEJO01008736
238121
Bacteroidota
CTT
Lys
>WENV181174088
OEJO01009552
126641
Bacteroidota
TAC
Val
>WENV181174187
OEJO01036680
338132
Bacteroidota
GCA
Cys
>WENV181173956
OEJO01002322
58714
Bacteroidota
CAA
Leu
>WENV181173990
OEJO01003345
235165
Bacteroidota
CCA
Trp
>WENV181173985
OEJO01003269
144933
Bacteroidota
TCT
Arg
>WENV181174186
OEJO01036233
171336
Bacteroidota
GGC
Ala
>WENV181173949
OEJO01002084
144656
Bacteroidota
GTG
His
>WENV181173862
OEJO01000410
235207
Bacteroidota
CAT
Met
>WENV181173838
OEJO01000125
235207
Bacteroidota
CAT
Met
>WENV181174263
OEJO01078391
144659
Bacteroidota
GTG
His
>WENV181174052
OEJO01006339
235180
Bacteroidota
CCA
Trp
>WENV181173805
OEJO01000006
144596
Bacteroidota
GGC
Ala
>WENV181173884
OEJO01000717
80607
Bacteroidota
GTA
Tyr
>WENV181173875
OEJO01000600
80607
Bacteroidota
GTA
Tyr
>WENV181173807
OEJO01000009
80607
Bacteroidota
GTA
Tyr
>WENV181173972
OEJO01002818
80607
Bacteroidota
GTA
Tyr
>WENV181174250
OEJO01071540
80614
Bacteroidota
>WENV181174027
OEJO01004828
80614
Bacteroidota
>WENV181173991
OEJO01003393
80614
Bacteroidota
>WENV181174040
OEJO01005603
154643
Bacteroidota
CAT
Met
>WENV181174265
OEJO01078409
144590
Bacteroidota
GTT
Asn
>WENV181174256
OEJO01077330
419272
Bacteroidota
CTG
Gln
>WENV181173943
OEJO01001873
144655
Bacteroidota
GGC
Ala
>WENV181173997
OEJO01003765
338164
Bacteroidota
TTC
Glu
>WENV181173954
OEJO01002287
95875
Bacteroidota
TAG
Leu
>WENV181173899
OEJO01000925
95875
Bacteroidota
TAG
Leu
>WENV181174004
OEJO01004047
240012
Bacteroidota
CCC
Gly
>WENV181173815
OEJO01000044
44852
Bacteroidota
TAA
Leu
>WENV181174038
OEJO01005555
147439
Bacteroidota
TCT
Arg
>WENV181173855
OEJO01000367
150485
Bacteroidota
GTT
Asn
>WENV181174182
OEJO01034225
338165
Bacteroidota
GGT
Thr
>WENV181173819
OEJO01000082
132360
Bacteroidota
GGG
Pro
>WENV181173818
OEJO01000081
132360
Bacteroidota
GGG
Pro
>WENV181173893
OEJO01000806
239647
Bacteroidota
TTT
Lys
>WENV181174044
OEJO01006063
353927
Bacteroidota
TTC
Glu
>WENV181173930
OEJO01001476
353927
Bacteroidota
TTC
Glu
>WENV181174207
OEJO01044478
23696
Bacteroidota
GCT
Ser
>WENV181174262
OEJO01078330
414426
Bacteroidota
CTG
Gln
>WENV181173876
OEJO01000638
16224
Bacteroidota
GGA
Ser
>WENV181173859
OEJO01000371
16220
Bacteroidota
GGA
Ser
>WENV181173918
OEJO01001191
338125
Bacteroidota
CCT
Arg
>WENV181173982
OEJO01003143
235129
Bacteroidota
GCC
Gly
>WENV181174065
OEJO01007328
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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