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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181203093
OERT01001573
144789
Gammaproteobacteria
GGG
Pro
>WENV181203016
OERT01000176
340342
Gammaproteobacteria
TTG
Gln
>WENV181203017
OERT01000176
144784
Gammaproteobacteria
CAT
Met
>WENV181202998
OERT01000091
144790
Gammaproteobacteria
CGG
Pro
>WENV181203018
OERT01000176
113614
Gammaproteobacteria
TAG
Leu
>WENV181203027
OERT01000302
6883
Gammaproteobacteria
GCT
Ser
>WENV181203028
OERT01000302
144788
Gammaproteobacteria
>WENV181202983
OERT01000009
162284
Gammaproteobacteria
CCA
Trp
>WENV181202982
OERT01000005
52727
Gammaproteobacteria
GGA
Ser
>WENV181203063
OERT01000818
144793
Gammaproteobacteria
GAC
Val
>WENV181203062
OERT01000818
144793
Gammaproteobacteria
GAC
Val
>WENV181203000
OERT01000113
166649
Gammaproteobacteria
CCT
Arg
>WENV181203069
OERT01001103
148441
Gammaproteobacteria
TGG
Pro
>WENV181202986
OERT01000015
148441
Gammaproteobacteria
TGG
Pro
>WENV181203052
OERT01000581
237174
Gammaproteobacteria
CGT
Thr
>WENV181203104
OERT01001887
235317
Gammaproteobacteria
GGT
Thr
>WENV181203178
OERT01010298
191498
Gammaproteobacteria
CAT
Met
>WENV181203061
OERT01000818
144792
Gammaproteobacteria
GAC
Val
>WENV181202996
OERT01000071
83458
Gammaproteobacteria
CAG
Leu
>WENV181203004
OERT01000125
146661
Gammaproteobacteria
CAT
Met
>WENV181203037
OERT01000366
295745
Gammaproteobacteria
TGT
Thr
>WENV181203035
OERT01000366
295745
Gammaproteobacteria
TGT
Thr
>WENV181203084
OERT01001413
235313
Gammaproteobacteria
GTT
Asn
>WENV181203003
OERT01000121
152286
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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