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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181205653
OFAO01000528
238673
Bacteroidota
GAA
Phe
>WENV181205654
OFAO01000528
238673
Bacteroidota
GAA
Phe
>WENV181205660
OFAO01000900
146962
Bacteroidota
CAT
Met
>WENV181205649
OFAO01000303
165001
Bacteroidota
GTT
Asn
>WENV181205678
OFAO01002851
61800
Bacteroidota
TAA
Leu
>WENV181205657
OFAO01000765
238872
Bacteroidota
TTT
Lys
>WENV181205658
OFAO01000765
238872
Bacteroidota
TTT
Lys
>WENV181205669
OFAO01002194
349706
Bacteroidota
TTC
Glu
>WENV181205639
OFAO01000021
268513
Bacteroidota
TCC
Gly
>WENV181205659
OFAO01000803
168744
Bacteroidota
GTG
His
>WENV181205640
OFAO01000021
340152
Bacteroidota
GGT
Thr
>WENV181205638
OFAO01000021
113760
Bacteroidota
GTA
Tyr
>WENV181205689
OFAO01003735
176247
Bacteroidota
TCT
Arg
>WENV181205666
OFAO01002073
412441
Bacteroidota
TTG
Gln
>WENV181205656
OFAO01000641
412441
Bacteroidota
TTG
Gln
>WENV181205645
OFAO01000199
54270
Bacteroidota
TGA
Ser
>WENV181205677
OFAO01002851
96124
Bacteroidota
TAG
Leu
>WENV181205674
OFAO01002666
340028
Bacteroidota
TTC
Glu
>WENV181205644
OFAO01000171
179613
Bacteroidota
CAT
Met
>WENV181205637
OFAO01000021
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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