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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181219548
OFCP01000076
119661
Verrucomicrobiota
CAA
Leu
>WENV181219598
OFCP01000148
155256
Verrucomicrobiota
TCT
Arg
>WENV181219495
OFCP01000030
246701
Verrucomicrobiota
TTT
Lys
>WENV181219440
OFCP01000001
345141
Verrucomicrobiota
TTG
Gln
>WENV181219502
OFCP01000035
345133
Verrucomicrobiota
GAC
Val
>WENV181219443
OFCP01000002
82054
Verrucomicrobiota
GTA
Tyr
>WENV181219659
OFCP01000252
246677
Verrucomicrobiota
CTT
Lys
>WENV181219658
OFCP01000252
246677
Verrucomicrobiota
CTT
Lys
>WENV181219450
OFCP01000004
344844
Verrucomicrobiota
GCA
Cys
>WENV181219518
OFCP01000043
155264
Verrucomicrobiota
GGG
Pro
>WENV181219441
OFCP01000001
344845
Verrucomicrobiota
CTG
Gln
>WENV181219717
OFCP01000436
128202
Verrucomicrobiota
GTC
Asp
>WENV181219472
OFCP01000016
128202
Verrucomicrobiota
GTC
Asp
>WENV181219484
OFCP01000020
414625
Verrucomicrobiota
CCC
Gly
>WENV181219494
OFCP01000028
46246
Verrucomicrobiota
TGA
Ser
>WENV181219606
OFCP01000163
97755
Verrucomicrobiota
TAG
Leu
>WENV181219451
OFCP01000004
246700
Verrucomicrobiota
TTC
Glu
>WENV181219446
OFCP01000004
246700
Verrucomicrobiota
TTC
Glu
>WENV181219533
OFCP01000061
246687
Verrucomicrobiota
CGC
Ala
>WENV181219439
OFCP01000001
344841
Verrucomicrobiota
CAC
Val
>WENV181219556
OFCP01000082
60880
Verrucomicrobiota
CAG
Leu
>WENV181219549
OFCP01000076
82056
Verrucomicrobiota
TAA
Leu
>WENV181219657
OFCP01000252
344842
Verrucomicrobiota
CGT
Thr
>WENV181219561
OFCP01000087
170105
Verrucomicrobiota
CAT
Met
>WENV181219520
OFCP01000044
287733
Verrucomicrobiota
CCA
Trp
>WENV181219532
OFCP01000061
345123
Verrucomicrobiota
TGT
Thr
>WENV181219607
OFCP01000163
345110
Verrucomicrobiota
CCT
Arg
>WENV181219447
OFCP01000004
344839
Verrucomicrobiota
GTG
His
>WENV181219581
OFCP01000125
7274
Verrucomicrobiota
CGA
Ser
>WENV181219550
OFCP01000076
246260
Verrucomicrobiota
>WENV181219660
OFCP01000252
155268
Verrucomicrobiota
CGG
Pro
>WENV181219482
OFCP01000020
246728
Verrucomicrobiota
GAA
Phe
>WENV181219617
OFCP01000174
7256
Verrucomicrobiota
GCT
Ser
>WENV181219444
OFCP01000004
345115
Verrucomicrobiota
CAT
Met
>WENV181219501
OFCP01000034
345119
Verrucomicrobiota
TAC
Val
>WENV181219442
OFCP01000002
345124
Verrucomicrobiota
GTT
Asn
>WENV181219575
OFCP01000120
368497
Verrucomicrobiota
GCC
Gly
>WENV181219445
OFCP01000004
368497
Verrucomicrobiota
GCC
Gly
>WENV181219485
OFCP01000020
345142
Verrucomicrobiota
CCG
Arg
>WENV181219448
OFCP01000004
246709
Verrucomicrobiota
CAT
Met
>WENV181219483
OFCP01000020
154693
Verrucomicrobiota
TGG
Pro
>WENV181219519
OFCP01000044
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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