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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181220648
OFCS01000006
235097
Bacteroidota
TTT
Lys
>WENV181220788
OFCS01000229
235102
Bacteroidota
CGT
Thr
>WENV181220812
OFCS01000425
338155
Bacteroidota
CTC
Glu
>WENV181220821
OFCS01000569
126965
Bacteroidota
GGG
Pro
>WENV181220945
OFCS01005484
338486
Bacteroidota
CAT
Met
>WENV181220668
OFCS01000021
48053
Bacteroidota
TGA
Ser
>WENV181220832
OFCS01000703
48053
Bacteroidota
TGA
Ser
>WENV181220851
OFCS01000897
48053
Bacteroidota
TGA
Ser
>WENV181220725
OFCS01000082
415410
Bacteroidota
TTG
Gln
>WENV181220855
OFCS01001061
179643
Bacteroidota
GTC
Asp
>WENV181220825
OFCS01000594
338124
Bacteroidota
CCG
Arg
>WENV181220794
OFCS01000260
126641
Bacteroidota
TAC
Val
>WENV181220698
OFCS01000041
338132
Bacteroidota
GCA
Cys
>WENV181220854
OFCS01001043
144933
Bacteroidota
TCT
Arg
>WENV181220702
OFCS01000050
144656
Bacteroidota
GTG
His
>WENV181220777
OFCS01000184
235207
Bacteroidota
CAT
Met
>WENV181220873
OFCS01001779
144596
Bacteroidota
GGC
Ala
>WENV181220745
OFCS01000111
80607
Bacteroidota
GTA
Tyr
>WENV181220970
OFCS01009288
80614
Bacteroidota
>WENV181220719
OFCS01000067
144590
Bacteroidota
GTT
Asn
>WENV181220718
OFCS01000067
144590
Bacteroidota
GTT
Asn
>WENV181220795
OFCS01000271
95559
Bacteroidota
TAG
Leu
>WENV181220819
OFCS01000538
419272
Bacteroidota
CTG
Gln
>WENV181220723
OFCS01000080
144655
Bacteroidota
GGC
Ala
>WENV181220713
OFCS01000059
44852
Bacteroidota
TAA
Leu
>WENV181220845
OFCS01000839
132360
Bacteroidota
GGG
Pro
>WENV181220870
OFCS01001714
239647
Bacteroidota
TTT
Lys
>WENV181220716
OFCS01000062
19317
Bacteroidota
GGA
Ser
>WENV181220914
OFCS01002479
16220
Bacteroidota
GGA
Ser
>WENV181220653
OFCS01000011
338125
Bacteroidota
CCT
Arg
>WENV181220674
OFCS01000026
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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