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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1028807
SRR035087.12237
236662
Chlorobiota
GGT
Thr
>SRA1029075
SRR035087.69287
236662
Chlorobiota
GGT
Thr
>SRA1029252
SRR035087.98062
236662
Chlorobiota
GGT
Thr
>SRA1029765
SRR035087.177920
146381
Chlorobiota
CAT
Met
>SRA1030639
SRR035087.308359
146381
Chlorobiota
CAT
Met
>SRA1028806
SRR035087.12237
80756
Chlorobiota
GTA
Tyr
>SRA1029074
SRR035087.69287
80756
Chlorobiota
GTA
Tyr
>SRA1029251
SRR035087.98062
80756
Chlorobiota
GTA
Tyr
>SRA1031108
SRR035087.374994
238645
Chlorobiota
GGC
Ala
>SRA1032320
SRR035087.604511
238645
Chlorobiota
GGC
Ala
>SRA1032338
SRR035087.608511
238645
Chlorobiota
GGC
Ala
>SRA1030102
SRR035087.227620
236833
Chlorobiota
CGT
Thr
>SRA1032223
SRR035087.580672
236833
Chlorobiota
CGT
Thr
>SRA1031671
SRR035087.468146
146232
Chlorobiota
GGG
Pro
>SRA1032389
SRR035087.620122
146232
Chlorobiota
GGG
Pro
>SRA1029766
SRR035087.177920
236933
Chlorobiota
CCC
Gly
>SRA1030640
SRR035087.308359
236933
Chlorobiota
CCC
Gly
>SRA1031878
SRR035087.503017
236933
Chlorobiota
CCC
Gly
>SRA1030721
SRR035087.319575
95795
Chlorobiota
CAG
Leu
>SRA1031550
SRR035087.448666
95795
Chlorobiota
CAG
Leu
>SRA1029199
SRR035087.91266
126816
Chlorobiota
GTC
Asp
>SRA1029993
SRR035087.213158
146165
Chlorobiota
GTG
His
>SRA1029076
SRR035087.69287
236663
Chlorobiota
CCA
Trp
>SRA1029253
SRR035087.98062
236663
Chlorobiota
CCA
Trp
>SRA1029372
SRR035087.118276
236663
Chlorobiota
CCA
Trp
>SRA1030047
SRR035087.220738
146283
Chlorobiota
TAC
Val
>SRA1030160
SRR035087.235122
146283
Chlorobiota
TAC
Val
>SRA1030064
SRR035087.222513
236974
Chlorobiota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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