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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1032641
SRR035088.70061
282274
Chlorobiota
CGC
Ala
>SRA1032710
SRR035088.85309
282274
Chlorobiota
CGC
Ala
>SRA1032780
SRR035088.102307
282274
Chlorobiota
CGC
Ala
>SRA1033092
SRR035088.171211
282274
Chlorobiota
CGC
Ala
>SRA1033455
SRR035088.262285
282274
Chlorobiota
CGC
Ala
>SRA1033645
SRR035088.311311
282274
Chlorobiota
CGC
Ala
>SRA1032914
SRR035088.128587
281169
Chlorobiota
CAT
Met
>SRA1033011
SRR035088.151289
281169
Chlorobiota
CAT
Met
>SRA1032445
SRR035088.11319
282263
Chlorobiota
TTT
Lys
>SRA1032782
SRR035088.102627
282263
Chlorobiota
TTT
Lys
>SRA1032798
SRR035088.105314
282263
Chlorobiota
TTT
Lys
>SRA1033477
SRR035088.268972
282263
Chlorobiota
TTT
Lys
>SRA1033828
SRR035088.367893
282263
Chlorobiota
TTT
Lys
>SRA1032657
SRR035088.74129
282414
Chlorobiota
TGC
Ala
>SRA1032693
SRR035088.80317
282414
Chlorobiota
TGC
Ala
>SRA1032797
SRR035088.105233
282414
Chlorobiota
TGC
Ala
>SRA1033297
SRR035088.217448
282414
Chlorobiota
TGC
Ala
>SRA1034101
SRR035088.487092
176477
Chlorobiota
CAT
Met
>SRA1032613
SRR035088.63599
176477
Chlorobiota
CAT
Met
>SRA1032675
SRR035088.76946
176477
Chlorobiota
CAT
Met
>SRA1032853
SRR035088.115744
176477
Chlorobiota
CAT
Met
>SRA1033005
SRR035088.150474
176477
Chlorobiota
CAT
Met
>SRA1033672
SRR035088.319297
176477
Chlorobiota
CAT
Met
>SRA1033812
SRR035088.362303
176477
Chlorobiota
CAT
Met
>SRA1032437
SRR035088.9911
177501
Chlorobiota
GTG
His
>SRA1032846
SRR035088.113989
177501
Chlorobiota
GTG
His
>SRA1033204
SRR035088.196259
177501
Chlorobiota
GTG
His
>SRA1033361
SRR035088.234789
177501
Chlorobiota
GTG
His
>SRA1034094
SRR035088.484115
177501
Chlorobiota
GTG
His
>SRA1032562
SRR035088.47530
282094
Chlorobiota
GGT
Thr
>SRA1032626
SRR035088.66700
282094
Chlorobiota
GGT
Thr
>SRA1032721
SRR035088.86779
282094
Chlorobiota
GGT
Thr
>SRA1032863
SRR035088.118389
282094
Chlorobiota
GGT
Thr
>SRA1033010
SRR035088.151199
282094
Chlorobiota
GGT
Thr
>SRA1032833
SRR035088.111646
284284
Chlorobiota
GGC
Ala
>SRA1033020
SRR035088.153038
284284
Chlorobiota
GGC
Ala
>SRA1033631
SRR035088.308389
284284
Chlorobiota
GGC
Ala
>SRA1032581
SRR035088.53787
177726
Chlorobiota
CAT
Met
>SRA1032746
SRR035088.93400
177726
Chlorobiota
CAT
Met
>SRA1033281
SRR035088.213415
177726
Chlorobiota
CAT
Met
>SRA1033460
SRR035088.263752
177726
Chlorobiota
CAT
Met
>SRA1033823
SRR035088.366605
177726
Chlorobiota
CAT
Met
>SRA1032868
SRR035088.119142
118002
Chlorobiota
CAG
Leu
>SRA1032892
SRR035088.123751
118002
Chlorobiota
CAG
Leu
>SRA1033513
SRR035088.276487
118002
Chlorobiota
CAG
Leu
>SRA1033546
SRR035088.285269
118002
Chlorobiota
CAG
Leu
>SRA1032485
SRR035088.23785
282471
Chlorobiota
CGG
Pro
>SRA1032725
SRR035088.87553
282471
Chlorobiota
CGG
Pro
>SRA1032969
SRR035088.141594
282471
Chlorobiota
CGG
Pro
>SRA1032787
SRR035088.103157
177570
Chlorobiota
GGG
Pro
>SRA1032989
SRR035088.145383
177570
Chlorobiota
GGG
Pro
>SRA1033469
SRR035088.266911
177570
Chlorobiota
GGG
Pro
>SRA1033735
SRR035088.340195
177570
Chlorobiota
GGG
Pro
>SRA1033774
SRR035088.350936
177570
Chlorobiota
GGG
Pro
>SRA1033996
SRR035088.438391
177570
Chlorobiota
GGG
Pro
>SRA1032439
SRR035088.11044
230640
Chlorobiota
GAT
Ile
>SRA1033218
SRR035088.198836
230640
Chlorobiota
GAT
Ile
>SRA1033296
SRR035088.217448
230640
Chlorobiota
GAT
Ile
>SRA1032606
SRR035088.61214
155915
Chlorobiota
GTC
Asp
>SRA1032704
SRR035088.82623
155915
Chlorobiota
GTC
Asp
>SRA1032803
SRR035088.106465
155915
Chlorobiota
GTC
Asp
>SRA1033033
SRR035088.155693
155915
Chlorobiota
GTC
Asp
>SRA1033118
SRR035088.178281
155915
Chlorobiota
GTC
Asp
>SRA1033341
SRR035088.230067
155915
Chlorobiota
GTC
Asp
>SRA1032491
SRR035088.25517
282186
Chlorobiota
TGG
Pro
>SRA1032549
SRR035088.44577
282186
Chlorobiota
TGG
Pro
>SRA1033202
SRR035088.196259
282186
Chlorobiota
TGG
Pro
>SRA1033298
SRR035088.218076
282186
Chlorobiota
TGG
Pro
>SRA1033701
SRR035088.329344
282186
Chlorobiota
TGG
Pro
>SRA1032793
SRR035088.103985
177626
Chlorobiota
TAC
Val
>SRA1033431
SRR035088.255967
177626
Chlorobiota
TAC
Val
>SRA1033521
SRR035088.277667
177626
Chlorobiota
TAC
Val
>SRA1033740
SRR035088.341269
177626
Chlorobiota
TAC
Val
>SRA1033921
SRR035088.408059
177626
Chlorobiota
TAC
Val
>SRA1034077
SRR035088.476728
177626
Chlorobiota
TAC
Val
>SRA1034084
SRR035088.481203
177626
Chlorobiota
TAC
Val
>SRA1032660
SRR035088.74569
282373
Chlorobiota
CCC
Gly
>SRA1032921
SRR035088.129455
282373
Chlorobiota
CCC
Gly
>SRA1033461
SRR035088.263752
282373
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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