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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1040604
SRR035091.121922
282263
Chlorobiota
TTT
Lys
>SRA1041795
SRR035091.296479
282263
Chlorobiota
TTT
Lys
>SRA1041838
SRR035091.303482
282263
Chlorobiota
TTT
Lys
>SRA1040327
SRR035091.78960
282414
Chlorobiota
TGC
Ala
>SRA1040665
SRR035091.129829
282414
Chlorobiota
TGC
Ala
>SRA1042300
SRR035091.369472
176477
Chlorobiota
CAT
Met
>SRA1042224
SRR035091.358589
177501
Chlorobiota
GTG
His
>SRA1042508
SRR035091.400276
282094
Chlorobiota
GGT
Thr
>SRA1041040
SRR035091.186470
284284
Chlorobiota
GGC
Ala
>SRA1041114
SRR035091.198698
284284
Chlorobiota
GGC
Ala
>SRA1041367
SRR035091.233294
284284
Chlorobiota
GGC
Ala
>SRA1040691
SRR035091.133956
177726
Chlorobiota
CAT
Met
>SRA1041893
SRR035091.311571
177726
Chlorobiota
CAT
Met
>SRA1042735
SRR035091.437925
177726
Chlorobiota
CAT
Met
>SRA1042829
SRR035091.451813
177726
Chlorobiota
CAT
Met
>SRA1039994
SRR035091.12740
118002
Chlorobiota
CAG
Leu
>SRA1040013
SRR035091.18041
118002
Chlorobiota
CAG
Leu
>SRA1041365
SRR035091.232969
118002
Chlorobiota
CAG
Leu
>SRA1041541
SRR035091.258160
118002
Chlorobiota
CAG
Leu
>SRA1042169
SRR035091.349418
118002
Chlorobiota
CAG
Leu
>SRA1040218
SRR035091.60840
177570
Chlorobiota
GGG
Pro
>SRA1041301
SRR035091.225364
177570
Chlorobiota
GGG
Pro
>SRA1040664
SRR035091.129829
230640
Chlorobiota
GAT
Ile
>SRA1042208
SRR035091.356218
230640
Chlorobiota
GAT
Ile
>SRA1042479
SRR035091.395168
282186
Chlorobiota
TGG
Pro
>SRA1040080
SRR035091.34465
177626
Chlorobiota
TAC
Val
>SRA1040304
SRR035091.75201
177626
Chlorobiota
TAC
Val
>SRA1040692
SRR035091.133956
282373
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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