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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051659
SRR035098.51670
292138
Cyanobacteriota
CCA
Trp
>SRA1051995
SRR035098.120932
292138
Cyanobacteriota
CCA
Trp
>SRA1052084
SRR035098.137448
292138
Cyanobacteriota
CCA
Trp
>SRA1052403
SRR035098.196494
292138
Cyanobacteriota
CCA
Trp
>SRA1052569
SRR035098.231435
292138
Cyanobacteriota
CCA
Trp
>SRA1052595
SRR035098.234833
292138
Cyanobacteriota
CCA
Trp
>SRA1052764
SRR035098.269362
292138
Cyanobacteriota
CCA
Trp
>SRA1052899
SRR035098.296188
292138
Cyanobacteriota
CCA
Trp
>SRA1052916
SRR035098.299615
292138
Cyanobacteriota
CCA
Trp
>SRA1052995
SRR035098.315470
292138
Cyanobacteriota
CCA
Trp
>SRA1053391
SRR035098.397348
292138
Cyanobacteriota
CCA
Trp
>SRA1053580
SRR035098.443356
292138
Cyanobacteriota
CCA
Trp
>SRA1051870
SRR035098.90615
212126
Cyanobacteriota
GTC
Asp
>SRA1051954
SRR035098.113211
212126
Cyanobacteriota
GTC
Asp
>SRA1052172
SRR035098.155521
212126
Cyanobacteriota
GTC
Asp
>SRA1052218
SRR035098.161777
212126
Cyanobacteriota
GTC
Asp
>SRA1052297
SRR035098.176992
212126
Cyanobacteriota
GTC
Asp
>SRA1052715
SRR035098.257418
212126
Cyanobacteriota
GTC
Asp
>SRA1052852
SRR035098.285751
212126
Cyanobacteriota
GTC
Asp
>SRA1052918
SRR035098.299782
212126
Cyanobacteriota
GTC
Asp
>SRA1053049
SRR035098.325499
212126
Cyanobacteriota
GTC
Asp
>SRA1053065
SRR035098.329411
212126
Cyanobacteriota
GTC
Asp
>SRA1053245
SRR035098.367529
212126
Cyanobacteriota
GTC
Asp
>SRA1051564
SRR035098.30279
453054
Cyanobacteriota
GAC
Val
>SRA1051944
SRR035098.111204
453054
Cyanobacteriota
GAC
Val
>SRA1051975
SRR035098.116124
453054
Cyanobacteriota
GAC
Val
>SRA1052324
SRR035098.182685
453054
Cyanobacteriota
GAC
Val
>SRA1052379
SRR035098.192435
453054
Cyanobacteriota
GAC
Val
>SRA1052657
SRR035098.247001
453054
Cyanobacteriota
GAC
Val
>SRA1052877
SRR035098.290187
453054
Cyanobacteriota
GAC
Val
>SRA1053669
SRR035098.463022
453054
Cyanobacteriota
GAC
Val
>SRA1051649
SRR035098.48402
57522
Cyanobacteriota
CGA
Ser
>SRA1051758
SRR035098.71335
57522
Cyanobacteriota
CGA
Ser
>SRA1052022
SRR035098.124849
57522
Cyanobacteriota
CGA
Ser
>SRA1052035
SRR035098.127603
57522
Cyanobacteriota
CGA
Ser
>SRA1052080
SRR035098.136528
57522
Cyanobacteriota
CGA
Ser
>SRA1051996
SRR035098.121098
16506
Cyanobacteriota
GCT
Ser
>SRA1053417
SRR035098.401809
16506
Cyanobacteriota
GCT
Ser
>SRA1052962
SRR035098.308633
30885
Cyanobacteriota
GGA
Ser
>SRA1051489
SRR035098.14715
221462
Cyanobacteriota
CCT
Arg
>SRA1051948
SRR035098.111828
221462
Cyanobacteriota
CCT
Arg
>SRA1052116
SRR035098.144411
221462
Cyanobacteriota
CCT
Arg
>SRA1052206
SRR035098.160051
221462
Cyanobacteriota
CCT
Arg
>SRA1052634
SRR035098.240777
221462
Cyanobacteriota
CCT
Arg
>SRA1052679
SRR035098.251804
221462
Cyanobacteriota
CCT
Arg
>SRA1052878
SRR035098.291208
221462
Cyanobacteriota
CCT
Arg
>SRA1053230
SRR035098.365163
221462
Cyanobacteriota
CCT
Arg
>SRA1053392
SRR035098.397460
221462
Cyanobacteriota
CCT
Arg
>SRA1053397
SRR035098.398099
221462
Cyanobacteriota
CCT
Arg
>SRA1053678
SRR035098.466566
221462
Cyanobacteriota
CCT
Arg
>SRA1051546
SRR035098.27177
183676
Cyanobacteriota
GAT
Ile
>SRA1052141
SRR035098.148851
183676
Cyanobacteriota
GAT
Ile
>SRA1052180
SRR035098.156874
183676
Cyanobacteriota
GAT
Ile
>SRA1052338
SRR035098.184258
183676
Cyanobacteriota
GAT
Ile
>SRA1053082
SRR035098.332623
183676
Cyanobacteriota
GAT
Ile
>SRA1053238
SRR035098.366330
183676
Cyanobacteriota
GAT
Ile
>SRA1053841
SRR035098.511053
183676
Cyanobacteriota
GAT
Ile
>SRA1051577
SRR035098.33331
208578
Cyanobacteriota
CGG
Pro
>SRA1052217
SRR035098.161755
208578
Cyanobacteriota
CGG
Pro
>SRA1052380
SRR035098.192501
208578
Cyanobacteriota
CGG
Pro
>SRA1052519
SRR035098.219599
208578
Cyanobacteriota
CGG
Pro
>SRA1052793
SRR035098.277110
208578
Cyanobacteriota
CGG
Pro
>SRA1052937
SRR035098.303528
208578
Cyanobacteriota
CGG
Pro
>SRA1053467
SRR035098.411852
208578
Cyanobacteriota
CGG
Pro
>SRA1053788
SRR035098.495796
208578
Cyanobacteriota
CGG
Pro
>SRA1051789
SRR035098.76856
126285
Cyanobacteriota
GTA
Tyr
>SRA1052293
SRR035098.176775
126285
Cyanobacteriota
GTA
Tyr
>SRA1052636
SRR035098.241029
126285
Cyanobacteriota
GTA
Tyr
>SRA1053130
SRR035098.345530
126285
Cyanobacteriota
GTA
Tyr
>SRA1053231
SRR035098.365247
126285
Cyanobacteriota
GTA
Tyr
>SRA1053428
SRR035098.403433
126285
Cyanobacteriota
GTA
Tyr
>SRA1053489
SRR035098.417506
126285
Cyanobacteriota
GTA
Tyr
>SRA1053695
SRR035098.469449
126285
Cyanobacteriota
GTA
Tyr
>SRA1053728
SRR035098.478364
126285
Cyanobacteriota
GTA
Tyr
>SRA1053831
SRR035098.507410
126285
Cyanobacteriota
GTA
Tyr
>SRA1052027
SRR035098.126598
178673
Cyanobacteriota
CCG
Arg
>SRA1052672
SRR035098.250575
178673
Cyanobacteriota
CCG
Arg
>SRA1052709
SRR035098.256047
178673
Cyanobacteriota
CCG
Arg
>SRA1053244
SRR035098.367169
178673
Cyanobacteriota
CCG
Arg
>SRA1053529
SRR035098.427807
178673
Cyanobacteriota
CCG
Arg
>SRA1053723
SRR035098.477245
178673
Cyanobacteriota
CCG
Arg
>SRA1053802
SRR035098.499583
178673
Cyanobacteriota
CCG
Arg
>SRA1051600
SRR035098.36880
73307
Cyanobacteriota
CAG
Leu
>SRA1051909
SRR035098.100867
73307
Cyanobacteriota
CAG
Leu
>SRA1051943
SRR035098.111084
73307
Cyanobacteriota
CAG
Leu
>SRA1052283
SRR035098.174969
73307
Cyanobacteriota
CAG
Leu
>SRA1052350
SRR035098.185681
73307
Cyanobacteriota
CAG
Leu
>SRA1052428
SRR035098.200788
73307
Cyanobacteriota
CAG
Leu
>SRA1052685
SRR035098.253178
73307
Cyanobacteriota
CAG
Leu
>SRA1052906
SRR035098.298009
73307
Cyanobacteriota
CAG
Leu
>SRA1052964
SRR035098.309013
73307
Cyanobacteriota
CAG
Leu
>SRA1053302
SRR035098.377953
73307
Cyanobacteriota
CAG
Leu
>SRA1053402
SRR035098.398880
73307
Cyanobacteriota
CAG
Leu
>SRA1053405
SRR035098.399683
73307
Cyanobacteriota
CAG
Leu
>SRA1052203
SRR035098.159788
282452
Cyanobacteriota
GGC
Ala
>SRA1052332
SRR035098.183429
282452
Cyanobacteriota
GGC
Ala
>SRA1052896
SRR035098.295889
282452
Cyanobacteriota
GGC
Ala
>SRA1052945
SRR035098.305341
282452
Cyanobacteriota
GGC
Ala
>SRA1053196
SRR035098.359549
282452
Cyanobacteriota
GGC
Ala
>SRA1053225
SRR035098.364245
282452
Cyanobacteriota
GGC
Ala
>SRA1053226
SRR035098.364550
282452
Cyanobacteriota
GGC
Ala
>SRA1053358
SRR035098.390750
282452
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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