tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = CCT

HIT: 24 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.235073 (4 seq.)
>WENV170623608 FUWD013160274 [FUWD] metagenome; unknown 901 979 + Arg CCT [ENA]
>WENV170631885 FUWD013369768 [FUWD] metagenome; unknown 901 979 + Arg CCT [ENA]
>SRA1025668 SRR035085.63598 454 Sequencing (SRP001806) 117 39 - Arg CCT [SRA]
>SRA1029536 SRR035087.142967 454 Sequencing (SRP001808) 154 232 + Arg CCT [SRA]
Identical group No.240811 (1 seq.)
>SRA1026108 SRR035085.145371 454 Sequencing (SRP001806) 121 198 + Arg CCT [SRA]
Identical group No.240832 (1 seq.)
>SRA1026598 SRR035085.236888 454 Sequencing (SRP001806) 266 340 + Arg CCT [SRA]
Identical group No.272248 (2 seq.)
>SRA1025504 SRR035085.27075 454 Sequencing (SRP001806) 193 118 - Arg CCT [SRA]
>SRA1025824 SRR035085.89323 454 Sequencing (SRP001806) 193 118 - Arg CCT [SRA]
Identical group No.272308 (1 seq.)
>SRA1025797 SRR035085.85410 454 Sequencing (SRP001806) 111 184 + Arg CCT [SRA]
Identical group No.272310 (1 seq.)
>SRA1025817 SRR035085.88645 454 Sequencing (SRP001806) 361 285 - Arg CCT [SRA]
Identical group No.272331 (1 seq.)
>SRA1025922 SRR035085.110871 454 Sequencing (SRP001806) 415 340 - Arg CCT [SRA]
Identical group No.272349 (3 seq.)
>WENV170607847 FUWD010860866 [FUWD] metagenome; unknown 137 62 - Arg CCT [ENA]
>SRA1026050 SRR035085.132311 454 Sequencing (SRP001806) 120 45 - Arg CCT [SRA]
>SRA1026264 SRR035085.175021 454 Sequencing (SRP001806) 120 45 - Arg CCT [SRA]
Identical group No.272388 (8 seq.)
>WENV170616123 FUWD012878456 [FUWD] metagenome; unknown 100 24 - Arg CCT [ENA]
>WENV170617305 FUWD012921235 [FUWD] metagenome; unknown 322 398 + Arg CCT [ENA]
>WENV170624234 FUWD013178211 [FUWD] metagenome; unknown 708 632 - Arg CCT [ENA]
>WENV170632516 FUWD013383794 [FUWD] metagenome; unknown 708 632 - Arg CCT [ENA]
>SRA1018995 SRR035082.383558 454 Sequencing (SRP001803) 100 24 - Arg CCT [SRA]
>SRA1019597 SRR035082.484761 454 Sequencing (SRP001803) 462 386 - Arg CCT [SRA]
>SRA1026312 SRR035085.184232 454 Sequencing (SRP001806) 332 408 + Arg CCT [SRA]
>SRA1035576 SRR035089.334157 454 Sequencing (SRP001810) 185 109 - Arg CCT [SRA]
Identical group No.272432 (14 seq.)
>W1710865794 LMGY01000016 Gammaproteobacteria Pseudoxanthomonas sp. Root630 (LMGY) 376965 377041 + Arg CCT [ENA]
>W131175924 ARJQ01000005 Gammaproteobacteria Rudaea cellulosilytica DSM 22992 [ARJQ] 809659 809735 + Arg CCT [ENA]
>W131226648 AUEN01000001 Gammaproteobacteria Lysobacter sp. URHA0019 [AUEN] 345223 345147 - Arg CCT [ENA]
>W141215615 AZUH01000016 Gammaproteobacteria Pseudoxanthomonas suwonensis J42 [AZUH] 28033 28109 + Arg CCT [ENA]
>W141216682 AZVB01000010 Gammaproteobacteria Pseudoxanthomonas sp. J35 [AZVB] 67789 67713 - Arg CCT [ENA]
>WENV170680643 LFEF01006777 [LFEF] freshwater metagenome; waterbloom 900 976 + Arg CCT [ENA]
>C181200053 CP031413 Gammaproteobacteria Lysobacter sp. TY2-98 (CP031413) 1736680 1736756 + Arg CCT -
>W1810195894 PKSO01000002 Gammaproteobacteria Pseudoxanthomonas sp. KAs_5_3 (PKSO) 748782 748706 - Arg CCT [ENA]
>SRA1026542 SRR035085.224933 454 Sequencing (SRP001806) 458 382 - Arg CCT [SRA]
>W1510018845 BBUM02000163 Gammaproteobacteria Mizugakiibacter sediminis skMP5 [BBUM] 6146 6222 + Arg CCT [ENA]
>C11118138 CP002446 Gammaproteobacteria Pseudoxanthomonas suwonensis 11-1 1366882 1366958 + Arg CCT [Ensembl]
>W1610728140 LMGY01000016 Gammaproteobacteria Pseudoxanthomonas sp. Root630 (LMGY) 376965 377041 + Arg CCT [ENA]
>WENV080065 AATO01002954 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 1429 1507 + Arg CCT [ENA]
>W1710579386 FPCI01000001 Gammaproteobacteria Pseudoxanthomonas sp. YR558 (FPCI) 721950 722026 + Arg CCT [ENA]
Identical group No.453262 (1 seq.)
>SRA1025693 SRR035085.67726 454 Sequencing (SRP001806) 288 215 - Arg CCT [SRA]
Identical group No.453400 (4 seq.)
>WENV170618167 FUWD012955648 [FUWD] metagenome; unknown 78 151 + Arg CCT [ENA]
>SRA1026488 SRR035085.215408 454 Sequencing (SRP001806) 83 156 + Arg CCT [SRA]
>SRA1030067 SRR035087.223626 454 Sequencing (SRP001808) 301 228 - Arg CCT [SRA]
>SRA1030899 SRR035087.344030 454 Sequencing (SRP001808) 248 175 - Arg CCT [SRA]
Identical group No.453406 (1 seq.)
>SRA1026536 SRR035085.223189 454 Sequencing (SRP001806) 470 543 + Arg CCT [SRA]
Identical group No.453425 (1 seq.)
>SRA1026642 SRR035085.247460 454 Sequencing (SRP001806) 92 167 + Arg CCT [SRA]
Identical group No.453433 (1 seq.)
>SRA1026689 SRR035085.261609 454 Sequencing (SRP001806) 247 322 + Arg CCT [SRA]
Identical group No.453455 (1 seq.)
>SRA1026830 SRR035085.305476 454 Sequencing (SRP001806) 196 271 + Arg CCT [SRA]
Identical group No.654241 (1 seq.)
>SRA1025536 SRR035085.35191 454 Sequencing (SRP001806) 233 307 + Arg CCT [SRA]
Identical group No.654291 (5 seq.)
>WENV170620519 FUWD013033102 [FUWD] metagenome; unknown 652 578 - Arg CCT [ENA]
>WENV170628662 FUWD013250548 [FUWD] metagenome; unknown 4356 4430 + Arg CCT [ENA]
>SRA1025887 SRR035085.103094 454 Sequencing (SRP001806) 288 362 + Arg CCT [SRA]
>SRA1033526 SRR035088.278921 454 Sequencing (SRP001809) 267 341 + Arg CCT [SRA]
>SRA1043352 SRR035092.99448 454 Sequencing (SRP001813) 408 334 - Arg CCT [SRA]
Identical group No.654315 (4 seq.)
>WENV170620123 FUWD013026221 [FUWD] metagenome; unknown 2414 2488 + Arg CCT [ENA]
>WENV170628256 FUWD013244073 [FUWD] metagenome; unknown 10922 10848 - Arg CCT [ENA]
>SRA1019527 SRR035082.471496 454 Sequencing (SRP001803) 264 338 + Arg CCT [SRA]
>SRA1026077 SRR035085.138988 454 Sequencing (SRP001806) 311 237 - Arg CCT [SRA]
Identical group No.654335 (1 seq.)
>SRA1026236 SRR035085.168690 454 Sequencing (SRP001806) 111 185 + Arg CCT [SRA]
Identical group No.654350 (58 seq.)
>WENV180367480 OBOE01105734 [OBOE] marine metagenome; ENVO:00002010 286 212 - Arg CCT [ENA]
>WENV182540400 OJAJ01000190 [OJAJ] seawater metagenome; Sea water 3964 3892 - Arg CCT [ENA]
>WENV182540806 OJAQ01000002 [OJAQ] seawater metagenome; Sea water 22557 22629 + Arg CCT [ENA]
>WENV182544229 OJBF01000004 [OJBF] seawater metagenome; Sea water 12968 12896 - Arg CCT [ENA]
>WENV182544945 OJBL01000442 [OJBL] seawater metagenome; Sea water 1729 1657 - Arg CCT [ENA]
>WENV182548493 OJBW01000721 [OJBW] seawater metagenome; Sea water 806 878 + Arg CCT [ENA]
>WENV182550017 OJBZ01001719 [OJBZ] seawater metagenome; Sea water 2197 2269 + Arg CCT [ENA]
>WENV182553160 OJCR01000201 [OJCR] seawater metagenome; Sea water 8776 8848 + Arg CCT [ENA]
>WENV182554088 OJCT01000932 [OJCT] seawater metagenome; Sea water 195 267 + Arg CCT [ENA]
>WENV182557037 OJDI01000466 [OJDI] seawater metagenome; Sea water 1208 1280 + Arg CCT [ENA]
>WENV182558522 OJDM01010786 [OJDM] seawater metagenome; Sea water 379 307 - Arg CCT [ENA]
>WENV182561574 OJDX01000006 [OJDX] seawater metagenome; Sea water 16144 16072 - Arg CCT [ENA]
>WENV182561911 OJDY01000006 [OJDY] seawater metagenome; Sea water 40941 41013 + Arg CCT [ENA]
>WENV182562631 OJDZ01028095 [OJDZ] seawater metagenome; Sea water 341 269 - Arg CCT [ENA]
>WENV182562641 OJEA01000003 [OJEA] seawater metagenome; Sea water 68297 68369 + Arg CCT [ENA]
>WENV182563036 OJEB01000006 [OJEB] seawater metagenome; Sea water 24478 24406 - Arg CCT [ENA]
>WENV182564014 OJEE01000001 [OJEE] seawater metagenome; Sea water 26420 26348 - Arg CCT [ENA]
>WENV182569012 OJEY01000018 [OJEY] seawater metagenome; Sea water 21919 21847 - Arg CCT [ENA]
>WENV182569704 OJFB01000050 [OJFB] seawater metagenome; Sea water 24151 24223 + Arg CCT [ENA]
>WENV182571083 OJFG01000296 [OJFG] seawater metagenome; Sea water 6281 6209 - Arg CCT [ENA]
>WENV182573729 OJFP01018116 [OJFP] seawater metagenome; Sea water 508 580 + Arg CCT [ENA]
>WENV182574523 OJFS01000004 [OJFS] seawater metagenome; Sea water 26195 26123 - Arg CCT [ENA]
>WENV182575819 OJFW01004117 [OJFW] seawater metagenome; Sea water 784 856 + Arg CCT [ENA]
>WENV182576566 OJFY01000125 [OJFY] seawater metagenome; Sea water 2212 2140 - Arg CCT [ENA]
>WENV182576918 OJGA01001368 [OJGA] seawater metagenome; Sea water 285 213 - Arg CCT [ENA]
>WENV182577937 OJGM01000058 [OJGM] seawater metagenome; Sea water 4372 4300 - Arg CCT [ENA]
>WENV182580760 OJGW01011578 [OJGW] seawater metagenome; Sea water 875 947 + Arg CCT [ENA]
>WENV182582088 OJHA01000006 [OJHA] seawater metagenome; Sea water 42182 42254 + Arg CCT [ENA]
>WENV182582400 OJHB01000031 [OJHB] seawater metagenome; Sea water 21009 20937 - Arg CCT [ENA]
>WENV182583203 OJHD01001195 [OJHD] seawater metagenome; Sea water 2270 2342 + Arg CCT [ENA]
>WENV182584726 OJHG01006581 [OJHG] seawater metagenome; Sea water 1587 1515 - Arg CCT [ENA]
>WENV182586807 OJHK01005631 [OJHK] seawater metagenome; Sea water 692 620 - Arg CCT [ENA]
>WENV182587538 OJHN01000009 [OJHN] seawater metagenome; Sea water 23510 23582 + Arg CCT [ENA]
>WENV182588428 OJHT01001637 [OJHT] seawater metagenome; Sea water 989 917 - Arg CCT [ENA]
>WENV182592319 OJIR01000009 [OJIR] seawater metagenome; Sea water 26506 26434 - Arg CCT [ENA]
>WENV183053662 OLGP01000508 [OLGP] seawater metagenome; Sea water 1523 1451 - Arg CCT [ENA]
>WENV183054500 OLGU01000003 [OLGU] seawater metagenome; Sea water 147485 147557 + Arg CCT [ENA]
>WENV183054985 OLGW01000313 [OLGW] seawater metagenome; Sea water 3162 3090 - Arg CCT [ENA]
>WENV183058983 OLHS01000503 [OLHS] seawater metagenome; Sea water 1079 1151 + Arg CCT [ENA]
>WENV183059188 OLHU01000001 [OLHU] seawater metagenome; Sea water 147687 147759 + Arg CCT [ENA]
>WENV183060209 OLHX01000087 [OLHX] seawater metagenome; Sea water 4675 4603 - Arg CCT [ENA]
>WENV170568530 FLMP01047686 [FLMP] seawater metagenome; seawater 1155 1083 - Arg CCT [ENA]
>WENV170624090 FUWD013174962 [FUWD] metagenome; unknown 8632 8706 + Arg CCT [ENA]
>WENV170627255 FUWD013232416 [FUWD] metagenome; unknown 12306 12380 + Arg CCT [ENA]
>WENV170627256 FUWD013232420 [FUWD] metagenome; unknown 17869 17795 - Arg CCT [ENA]
>WENV170632375 FUWD013381221 [FUWD] metagenome; unknown 8632 8706 + Arg CCT [ENA]
>WENV170952773 MEHZ011613730 [MEHZ] marine metagenome; marine surface water 23335 23263 - Arg CCT [ENA]
>W141532255 JHET01000006 Actinobacteria Microbacterium sp. CH12i [JHET] 81178 81250 + Arg CCT [ENA]
>SRA1026350 SRR035085.191030 454 Sequencing (SRP001806) 181 107 - Arg CCT [SRA]
>SRA1026473 SRR035085.213275 454 Sequencing (SRP001806) 181 107 - Arg CCT [SRA]
>SRA1045729 SRR035093.158141 454 Sequencing (SRP001814) 392 464 + Arg CCT [SRA]
>SRA1051613 SRR035098.38549 454 Sequencing (SRP001819) 207 133 - Arg CCT [SRA]
>SRA1051672 SRR035098.55934 454 Sequencing (SRP001819) 50 122 + Arg CCT [SRA]
>SRA1051682 SRR035098.57713 454 Sequencing (SRP001819) 207 133 - Arg CCT [SRA]
>SRA1051820 SRR035098.82868 454 Sequencing (SRP001819) 50 122 + Arg CCT [SRA]
>SRA1052526 SRR035098.220654 454 Sequencing (SRP001819) 144 72 - Arg CCT [SRA]
>SRA1052536 SRR035098.222964 454 Sequencing (SRP001819) 190 116 - Arg CCT [SRA]
>SRA1052723 SRR035098.261575 454 Sequencing (SRP001819) 134 206 + Arg CCT [SRA]
Identical group No.654358 (5 seq.)
>WENV170623437 FUWD013151479 [FUWD] metagenome; unknown 768 842 + Arg CCT [ENA]
>WENV170631513 FUWD013355334 [FUWD] metagenome; unknown 5282 5356 + Arg CCT [ENA]
>SRA1026390 SRR035085.199968 454 Sequencing (SRP001806) 383 457 + Arg CCT [SRA]
>SRA1026721 SRR035085.271358 454 Sequencing (SRP001806) 376 450 + Arg CCT [SRA]
>SRA1044795 SRR035092.346566 454 Sequencing (SRP001813) 199 125 - Arg CCT [SRA]
Identical group No.654367 (1 seq.)
>SRA1026441 SRR035085.207337 454 Sequencing (SRP001806) 70 144 + Arg CCT [SRA]
Identical group No.654410 (14 seq.)
>WENV170627291 FUWD013232509 [FUWD] metagenome; unknown 1050 1124 + Arg CCT [ENA]
>SRA1026821 SRR035085.303567 454 Sequencing (SRP001806) 87 161 + Arg CCT [SRA]
>SRA1032948 SRR035088.137250 454 Sequencing (SRP001809) 85 159 + Arg CCT [SRA]
>SRA1036187 SRR035089.465834 454 Sequencing (SRP001810) 317 243 - Arg CCT [SRA]
>SRA1040094 SRR035091.37846 454 Sequencing (SRP001812) 10 84 + Arg CCT [SRA]
>SRA1040879 SRR035091.163265 454 Sequencing (SRP001812) 328 254 - Arg CCT [SRA]
>SRA1041881 SRR035091.310269 454 Sequencing (SRP001812) 75 149 + Arg CCT [SRA]
>SRA1042951 SRR035091.472725 454 Sequencing (SRP001812) 53 127 + Arg CCT [SRA]
>SRA1044001 SRR035092.208534 454 Sequencing (SRP001813) 314 240 - Arg CCT [SRA]
>SRA1047872 SRR035094.59292 454 Sequencing (SRP001815) 425 351 - Arg CCT [SRA]
>SRA1048862 SRR035094.265935 454 Sequencing (SRP001815) 100 26 - Arg CCT [SRA]
>SRA1049065 SRR035095.13539 454 Sequencing (SRP001816) 306 380 + Arg CCT [SRA]
>SRA1049206 SRR035095.38023 454 Sequencing (SRP001816) 309 383 + Arg CCT [SRA]
>SRA1049446 SRR035095.79463 454 Sequencing (SRP001816) 417 343 - Arg CCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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