tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = CTT

HIT: 19 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.155950 (2 seq.)
>WENV170218784 CEPZ01022596 [CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3676 3600 - Lys CTT [ENA]
>SRA1026644 SRR035085.248206 454 Sequencing (SRP001806) 222 148 - Lys CTT [SRA]
Identical group No.177294 (2 seq.)
>WENV170607823 FUWD010859157 [FUWD] metagenome; unknown 25 99 + Lys CTT [ENA]
>SRA1025526 SRR035085.33729 454 Sequencing (SRP001806) 33 109 + Lys CTT [SRA]
Identical group No.177333 (25 seq.)
>WENV181413200 OGCK01038251 [OGCK] hot springs metagenome; hot spring sediment 961 1037 + Lys CTT [ENA]
>WENV170616053 FUWD012875755 [FUWD] metagenome; unknown 560 484 - Lys CTT [ENA]
>WENV170616589 FUWD012892690 [FUWD] metagenome; unknown 266 342 + Lys CTT [ENA]
>WENV170617549 FUWD012929501 [FUWD] metagenome; unknown 212 288 + Lys CTT [ENA]
>WENV170620356 FUWD013030264 [FUWD] metagenome; unknown 1893 1817 - Lys CTT [ENA]
>WENV170624203 FUWD013177659 [FUWD] metagenome; unknown 97 21 - Lys CTT [ENA]
>WENV170625248 FUWD013194035 [FUWD] metagenome; unknown 2729 2805 + Lys CTT [ENA]
>WENV170628493 FUWD013247842 [FUWD] metagenome; unknown 1893 1817 - Lys CTT [ENA]
>WENV170632486 FUWD013383366 [FUWD] metagenome; unknown 97 21 - Lys CTT [ENA]
>WENV170633493 FUWD013396979 [FUWD] metagenome; unknown 2729 2805 + Lys CTT [ENA]
>SRA1017973 SRR035082.223176 454 Sequencing (SRP001803) 129 53 - Lys CTT [SRA]
>SRA1018287 SRR035082.269545 454 Sequencing (SRP001803) 266 342 + Lys CTT [SRA]
>SRA1025739 SRR035085.73644 454 Sequencing (SRP001806) 108 184 + Lys CTT [SRA]
>SRA1025773 SRR035085.80455 454 Sequencing (SRP001806) 172 248 + Lys CTT [SRA]
>SRA1026215 SRR035085.164453 454 Sequencing (SRP001806) 200 276 + Lys CTT [SRA]
>SRA1026422 SRR035085.204921 454 Sequencing (SRP001806) 201 277 + Lys CTT [SRA]
>SRA1029870 SRR035087.194931 454 Sequencing (SRP001808) 159 235 + Lys CTT [SRA]
>SRA1032585 SRR035088.54066 454 Sequencing (SRP001809) 37 113 + Lys CTT [SRA]
>SRA1034441 SRR035089.96844 454 Sequencing (SRP001810) 355 279 - Lys CTT [SRA]
>SRA1036771 SRR035089.611671 454 Sequencing (SRP001810) 43 119 + Lys CTT [SRA]
>SRA1048205 SRR035094.128844 454 Sequencing (SRP001815) 346 422 + Lys CTT [SRA]
>SRA1048627 SRR035094.211844 454 Sequencing (SRP001815) 336 260 - Lys CTT [SRA]
>SRA1049070 SRR035095.14204 454 Sequencing (SRP001816) 250 326 + Lys CTT [SRA]
>SRA1049560 SRR035095.95725 454 Sequencing (SRP001816) 222 298 + Lys CTT [SRA]
>SRA1050309 SRR035095.234825 454 Sequencing (SRP001816) 78 154 + Lys CTT [SRA]
Identical group No.177334 (5 seq.)
>WENV170623585 FUWD013159183 [FUWD] metagenome; unknown 198 274 + Lys CTT [ENA]
>WENV170631862 FUWD013368685 [FUWD] metagenome; unknown 198 274 + Lys CTT [ENA]
>SRA1025740 SRR035085.74116 454 Sequencing (SRP001806) 349 425 + Lys CTT [SRA]
>SRA1025799 SRR035085.85586 454 Sequencing (SRP001806) 208 284 + Lys CTT [SRA]
>SRA1026172 SRR035085.157737 454 Sequencing (SRP001806) 352 428 + Lys CTT [SRA]
Identical group No.177336 (1 seq.)
>SRA1025763 SRR035085.79372 454 Sequencing (SRP001806) 284 357 + Lys CTT [SRA]
Identical group No.177345 (20 seq.)
>A171001430 CP001994 Euryarchaeota Methanohalophilus mahii DSM 5219 362908 362983 + Lys CTT -
>A171001722 CP002101 Euryarchaeota Methanosalsum zhilinae DSM 4017 2119802 2119877 + Lys CTT -
>A171005351 CP009518 Euryarchaeota Methanococcoides methylutens MM1 361579 361653 + Lys CTT -
>A171005352 CP009518 Euryarchaeota Methanococcoides methylutens MM1 363250 363324 + Lys CTT -
>A171006822 CP017921 Euryarchaeota Methanohalophilus halophilus Z-7982 358246 358171 - Lys CTT -
>At0975 CP000300 Euryarchaeota Methanococcoides burtonii DSM 6242 2257451 2257524 + Lys CTT [Ensembl]
>W1910228307 FNMU01000001 Euryarchaeota Methanohalophilus halophilus Z-7982 (FNMU) 172466 172391 - Lys CTT [ENA]
>W1910229843 FOHQ01000002 Euryarchaeota Methanococcoides vulcani SLH 33 (FOHQ) 282989 283063 + Lys CTT [ENA]
>W1910471797 FXBN01000001 Euryarchaeota Methanohalophilus portucalensis FDF-1 (FXBN) 700275 700200 - Lys CTT [ENA]
>W1910575261 JRHO01000009 Euryarchaeota Methanococcoides methylutens DSM 2657 (JRHO) 363634 363708 + Lys CTT [ENA]
>W1910575262 JRHO01000009 Euryarchaeota Methanococcoides methylutens DSM 2657 (JRHO) 363990 364064 + Lys CTT [ENA]
>W1910582966 JWTK01000002 Euryarchaeota Methanohalophilus portucalensis FDF-1 (JWTK) 309693 309768 + Lys CTT [ENA]
>W1910672539 MCNQ01000004 Euryarchaeota Methanohalophilus sp. 2-GBenrich (MCNQ) 161196 161121 - Lys CTT [ENA]
>W1911492128 OBDR01000003 Euryarchaeota Methanohalophilus euhalobius WG-1MB (OBDR) 150984 150909 - Lys CTT [ENA]
>W1911633752 PVBU01000003 Euryarchaeota Methanohalophilus euhalobius DSM 10369 (PVBU) 61462 61537 + Lys CTT [ENA]
>W1911653218 QBKB01000002 Euryarchaeota Methanohalophilus sp. SLHTYRO (QBKB) 761516 761441 - Lys CTT [ENA]
>SRA1025819 SRR035085.88774 454 Sequencing (SRP001806) 168 244 + Lys CTT [SRA]
>W1610000131 AADH02000006 Euryarchaeota Methanococcoides burtonii DSM 6242 [AADH] 137463 137389 - Lys CTT [ENA]
>W1610919883 LSRU01000122 Euryarchaeota Methanohalophilus sp. T328-1 [LSRU] 368 444 + Lys CTT [ENA]
>W1611052491 MAFX01000008 Euryarchaeota Methanohalophilus sp. DAL1 [MAFX] 36968 37044 + Lys CTT [ENA]
Identical group No.177394 (3 seq.)
>SRA1026161 SRR035085.156162 454 Sequencing (SRP001806) 66 141 + Lys CTT [SRA]
>SRA1034007 SRR035088.443973 454 Sequencing (SRP001809) 127 200 + Lys CTT [SRA]
>SRA1048734 SRR035094.237316 454 Sequencing (SRP001815) 183 256 + Lys CTT [SRA]
Identical group No.281927 (11 seq.)
>WENV170621358 FUWD013056610 [FUWD] metagenome; unknown 1706 1778 + Lys CTT [ENA]
>WENV170629537 FUWD013273014 [FUWD] metagenome; unknown 1706 1778 + Lys CTT [ENA]
>WENV170677807 LDZT01009210 [LDZT] terrestrial metagenome; oil reservoir sample SB1 21466 21391 - Lys CTT [ENA]
>WENV170679131 LDZU01008516 [LDZU] terrestrial metagenome; oil reservoir sample SB2 1414 1339 - Lys CTT [ENA]
>WENV170720794 LSQX01166830 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1197 1270 + Lys CTT [ENA]
>SRA1025454 SRR035085.10182 454 Sequencing (SRP001806) 341 413 + Lys CTT [SRA]
>SRA1030263 SRR035087.251993 454 Sequencing (SRP001808) 84 12 - Lys CTT [SRA]
>SRA1035570 SRR035089.332756 454 Sequencing (SRP001810) 23 95 + Lys CTT [SRA]
>SRA1035973 SRR035089.416381 454 Sequencing (SRP001810) 163 235 + Lys CTT [SRA]
>W1610613452 LGFW01000002 CandidatusParcubacteria Parcubacteria bacterium 33_209 (LGFW) 21466 21391 - Lys CTT [ENA]
>W1710734624 LGFW01000002 CandidatusParcubacteria Parcubacteria bacterium 33_209 (LGFW) 21466 21391 - Lys CTT [ENA]
Identical group No.281936 (4 seq.)
>WENV170607942 FUWD010873170 [FUWD] metagenome; unknown 79 4 - Lys CTT [ENA]
>SRA1025477 SRR035085.18979 454 Sequencing (SRP001806) 315 240 - Lys CTT [SRA]
>SRA1030973 SRR035087.356573 454 Sequencing (SRP001808) 75 1 - Lys CTT [SRA]
>SRA1031364 SRR035087.419821 454 Sequencing (SRP001808) 79 4 - Lys CTT [SRA]
Identical group No.281942 (6 seq.)
>WENV170605014 FUWD010441411 [FUWD] metagenome; unknown 101 28 - Lys CTT [ENA]
>SRA1019490 SRR035082.465660 454 Sequencing (SRP001803) 117 42 - Lys CTT [SRA]
>SRA1025507 SRR035085.27760 454 Sequencing (SRP001806) 168 243 + Lys CTT [SRA]
>SRA1026150 SRR035085.153450 454 Sequencing (SRP001806) 29 102 + Lys CTT [SRA]
>SRA1029097 SRR035087.71977 454 Sequencing (SRP001808) 101 28 - Lys CTT [SRA]
>SRA1045128 SRR035092.416732 454 Sequencing (SRP001813) 107 35 - Lys CTT [SRA]
Identical group No.281948 (1 seq.)
>SRA1025539 SRR035085.35923 454 Sequencing (SRP001806) 90 163 + Lys CTT [SRA]
Identical group No.281956 (2 seq.)
>WENV170599261 FUWD010069059 [FUWD] metagenome; unknown 729 801 + Lys CTT [ENA]
>SRA1025566 SRR035085.39923 454 Sequencing (SRP001806) 300 225 - Lys CTT [SRA]
Identical group No.281970 (3 seq.)
>WENV170607833 FUWD010859527 [FUWD] metagenome; unknown 628 554 - Lys CTT [ENA]
>SRA1025639 SRR035085.55200 454 Sequencing (SRP001806) 472 398 - Lys CTT [SRA]
>SRA1036487 SRR035089.531944 454 Sequencing (SRP001810) 120 194 + Lys CTT [SRA]
Identical group No.281998 (2 seq.)
>WENV170611840 FUWD012415248 [FUWD] metagenome; unknown 341 413 + Lys CTT [ENA]
>SRA1025754 SRR035085.77392 454 Sequencing (SRP001806) 351 423 + Lys CTT [SRA]
Identical group No.282026 (3 seq.)
>WENV170611849 FUWD012418837 [FUWD] metagenome; unknown 3 75 + Lys CTT [ENA]
>SRA1025911 SRR035085.107913 454 Sequencing (SRP001806) 13 85 + Lys CTT [SRA]
>SRA1049097 SRR035095.18753 454 Sequencing (SRP001816) 173 99 - Lys CTT [SRA]
Identical group No.282050 (21 seq.)
>WENV180063575 MPLX02362546 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 113 38 - Lys CTT [ENA]
>WENV170143188 CENY01055513 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 123 198 + Lys CTT [ENA]
>WENV170182180 CEOX01087465 [CEOX] marine metagenome genome assembly TARA_065_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 418 + Lys CTT [ENA]
>WENV170191057 CEPC01225803 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 635 710 + Lys CTT [ENA]
>WENV170197141 CEPK01105271 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 77 + Lys CTT [ENA]
>WENV170247746 CEQQ01062227 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 899 974 + Lys CTT [ENA]
>WENV170253513 CEQU01094828 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 326 401 + Lys CTT [ENA]
>WENV170262426 CERB01178827 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 651 576 - Lys CTT [ENA]
>WENV170280292 CERR01114303 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 594 519 - Lys CTT [ENA]
>WENV170347175 CETG01109507 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 173 248 + Lys CTT [ENA]
>WENV170352967 CETH01413521 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 642 717 + Lys CTT [ENA]
>WENV170353781 CETI01051001 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 482 407 - Lys CTT [ENA]
>WENV170416669 CEUL01140374 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 875 800 - Lys CTT [ENA]
>WENV170422639 CEUN01174176 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10930 11005 + Lys CTT [ENA]
>WENV170446977 CEUY01184036 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 390 465 + Lys CTT [ENA]
>WENV170464118 CEVD01195703 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 427 352 - Lys CTT [ENA]
>WENV170479524 CEVL01019800 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3914 3989 + Lys CTT [ENA]
>WENV170494209 CEVR01064678 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 77 + Lys CTT [ENA]
>WENV170824211 MDSY01071762 [MDSY] marine metagenome; seawater 2002 2077 + Lys CTT [ENA]
>WENV170944346 MDTG01413162 [MDTG] marine metagenome; seawater 3403 3478 + Lys CTT [ENA]
>SRA1026037 SRR035085.131285 454 Sequencing (SRP001806) 162 90 - Lys CTT [SRA]
Identical group No.282073 (3 seq.)
>WENV170607852 FUWD010861273 [FUWD] metagenome; unknown 69 143 + Lys CTT [ENA]
>SRA1026170 SRR035085.157541 454 Sequencing (SRP001806) 76 150 + Lys CTT [SRA]
>SRA1032137 SRR035087.560222 454 Sequencing (SRP001808) 67 141 + Lys CTT [SRA]
Identical group No.282153 (6 seq.)
>W1711584398 MNYK01000139 Deltaproteobacteria Desulfobacterales bacterium CG2_30_60_27 (MNYK) 297 372 + Lys CTT [ENA]
>W1711584399 MNYK01000139 Deltaproteobacteria Desulfobacterales bacterium CG2_30_60_27 (MNYK) 2035 2110 + Lys CTT [ENA]
>WENV181206344 OFAT01008788 [OFAT] metagenome; hydrothermal vent 469 394 - Lys CTT [ENA]
>WENV170597887 FUWD010017766 [FUWD] metagenome; unknown 4 79 + Lys CTT [ENA]
>C09103739 CP001087 Deltaproteobacteria Desulfobacterium autotrophicum HRM2 2302464 2302389 - Lys CTT [Ensembl]
>SRA1026799 SRR035085.293249 454 Sequencing (SRP001806) 201 276 + Lys CTT [SRA]
Identical group No.399634 (6 seq.)
>WENV170621493 FUWD013061040 [FUWD] metagenome; unknown 1559 1485 - Lys CTT [ENA]
>WENV170629675 FUWD013277251 [FUWD] metagenome; unknown 1559 1485 - Lys CTT [ENA]
>SRA1025745 SRR035085.74740 454 Sequencing (SRP001806) 232 158 - Lys CTT [SRA]
>SRA1025948 SRR035085.114996 454 Sequencing (SRP001806) 256 182 - Lys CTT [SRA]
>SRA1042196 SRR035091.352397 454 Sequencing (SRP001812) 78 4 - Lys CTT [SRA]
>SRA1044589 SRR035092.306913 454 Sequencing (SRP001813) 310 236 - Lys CTT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK