tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = GCC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272309 (27 seq.)
>W1711404293 MFYH01000023 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYA1_FULL_56_14 (MFYH) 30770 30694 - Gly GCC [ENA]
>W1711404350 MFYI01000016 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYA2_FULL_55_28 (MFYI) 58083 58159 + Gly GCC [ENA]
>W1711404379 MFYJ01000007 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYB1_FULL_54_35 (MFYJ) 73606 73530 - Gly GCC [ENA]
>W1711404406 MFYK01000006 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYB1_FULL_57_12 (MFYK) 16906 16982 + Gly GCC [ENA]
>W1711404464 MFYL01000013 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYB2_FULL_54_17 (MFYL) 312192 312268 + Gly GCC [ENA]
>W1711404490 MFYM01000002 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYC1_FULL_54_13 (MFYM) 84873 84949 + Gly GCC [ENA]
>W1711404574 MFYO01000006 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYC2_FULL_55_14 (MFYO) 54166 54242 + Gly GCC [ENA]
>W1711404612 MFYP01000007 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYC2_FULL_58_10 (MFYP) 8949 9025 + Gly GCC [ENA]
>W1711404671 MFYQ01000025 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYD1_FULL_54_13 (MFYQ) 53443 53519 + Gly GCC [ENA]
>W1711404705 MFYR01000006 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFOXYD2_FULL_58_15 (MFYR) 33256 33180 - Gly GCC [ENA]
>W1711582991 MNWP01000012 CandidatusPeregrinibacteria Candidatus Peregrinibacteria bacterium CG1_02_54_53 (MNWP) 6487 6563 + Gly GCC [ENA]
>WENV180270766 OBEQ012202348 [OBEQ] groundwater metagenome; groundwater 1053 1129 + Gly GCC [ENA]
>WENV183689174 ORMF011400159 [ORMF] groundwater metagenome; groundwater 372 296 - Gly GCC [ENA]
>W1910717029 MFXR01000008 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_54_22 (MFXR) 21466 21390 - Gly GCC [ENA]
>W1910717282 MFXX01000023 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_55_24 (MFXX) 14136 14212 + Gly GCC [ENA]
>W1910717319 MFXY01000040 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPHIGHO2_12_FULL_54_10 (MFXY) 20498 20574 + Gly GCC [ENA]
>W1910717462 MFYC01000035 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPLOWO2_01_FULL_54_110 (MFYC) 32509 32585 + Gly GCC [ENA]
>W1910717530 MFYE01000019 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPLOWO2_02_FULL_55_36 (MFYE) 9881 9957 + Gly GCC [ENA]
>W1910717606 MFYG01000013 CandidatusPeregrinibacteria Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15 (MFYG) 44633 44709 + Gly GCC [ENA]
>SRA1025805 SRR035085.86744 454 Sequencing (SRP001806) 421 345 - Gly GCC [SRA]
>W1511618885 LCRQ01000001 Peregrinibacteria Peregrinibacteria bacterium GW2011_GWB1_54_5 [LCRQ] 4317 4393 + Gly GCC [ENA]
>W1511619028 LCRV01000010 Peregrinibacteria Peregrinibacteria bacterium GW2011_GWA2_54_9 [LCRV] 77 1 - Gly GCC [ENA]
>C161050439 CP013062 Candidatus Peregrinibacteria Candidatus Peribacter riflensis isolate RIFOXYA2_FULL_PER-ii_58_14 673717 673793 + Gly GCC -
>C161050483 CP013063 Candidatus Peregrinibacteria Candidatus Peribacter riflensis isolate RIFOXYB2_FULL_PER-ii_58_17 673872 673948 + Gly GCC -
>C161050527 CP013064 Candidatus Peregrinibacteria Candidatus Peribacter riflensis isolate RIFOXYC2_FULL_PER-ii_58_32 673803 673879 + Gly GCC -
>C161050571 CP013065 Candidatus Peregrinibacteria Candidatus Peribacter riflensis isolate RIFOXYD1_FULL_PER-ii_59_16 673596 673672 + Gly GCC -
>C161050615 CP013066 Candidatus Peregrinibacteria Candidatus Peribacter riflensis isolate RIFOXYD2_FULL_PER-ii_51_23 673871 673947 + Gly GCC -
Identical group No.453294 (1 seq.)
>SRA1025856 SRR035085.95002 454 Sequencing (SRP001806) 111 187 + Gly GCC [SRA]
Identical group No.453392 (1 seq.)
>SRA1026383 SRR035085.198331 454 Sequencing (SRP001806) 159 234 + Gly GCC [SRA]
Identical group No.453409 (1 seq.)
>SRA1026556 SRR035085.227255 454 Sequencing (SRP001806) 111 36 - Gly GCC [SRA]
Identical group No.654277 (1 seq.)
>SRA1025788 SRR035085.83612 454 Sequencing (SRP001806) 157 231 + Gly GCC [SRA]
Identical group No.654302 (2 seq.)
>SRA1025964 SRR035085.118046 454 Sequencing (SRP001806) 98 24 - Gly GCC [SRA]
>SRA1050542 SRR035095.287665 454 Sequencing (SRP001816) 91 165 + Gly GCC [SRA]
Identical group No.654348 (9 seq.)
>WENV170598876 FUWD010052990 [FUWD] metagenome; unknown 432 506 + Gly GCC [ENA]
>WENV170624831 FUWD013187434 [FUWD] metagenome; unknown 346 272 - Gly GCC [ENA]
>WENV170633099 FUWD013391325 [FUWD] metagenome; unknown 346 272 - Gly GCC [ENA]
>SRA1026336 SRR035085.187784 454 Sequencing (SRP001806) 71 145 + Gly GCC [SRA]
>SRA1026438 SRR035085.207234 454 Sequencing (SRP001806) 103 177 + Gly GCC [SRA]
>SRA1031764 SRR035087.484317 454 Sequencing (SRP001808) 319 393 + Gly GCC [SRA]
>SRA1033475 SRR035088.268573 454 Sequencing (SRP001809) 251 325 + Gly GCC [SRA]
>SRA1033966 SRR035088.425241 454 Sequencing (SRP001809) 124 50 - Gly GCC [SRA]
>SRA1050664 SRR035095.318368 454 Sequencing (SRP001816) 83 157 + Gly GCC [SRA]
Identical group No.654362 (3 seq.)
>SRA1022169 SRR035083.362367 454 Sequencing (SRP001804) 351 279 - Gly GCC [SRA]
>SRA1026409 SRR035085.202893 454 Sequencing (SRP001806) 236 164 - Gly GCC [SRA]
>SRA1034040 SRR035088.462749 454 Sequencing (SRP001809) 14 86 + Gly GCC [SRA]
Identical group No.654364 (7 seq.)
>W1711399782 MFGC01000010 CandidatusFalkowbacteria Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_9 (MFGC) 10632 10706 + Gly GCC [ENA]
>W1711400149 MFGL01000025 CandidatusFalkowbacteria Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_47_12 (MFGL) 48678 48752 + Gly GCC [ENA]
>WENV170603279 FUWD010298443 [FUWD] metagenome; unknown 17 89 + Gly GCC [ENA]
>WENV170613112 FUWD012780963 [FUWD] metagenome; unknown 446 374 - Gly GCC [ENA]
>SRA1026426 SRR035085.205526 454 Sequencing (SRP001806) 301 229 - Gly GCC [SRA]
>SRA1048345 SRR035094.152164 454 Sequencing (SRP001815) 222 294 + Gly GCC [SRA]
>SRA1048730 SRR035094.236294 454 Sequencing (SRP001815) 207 279 + Gly GCC [SRA]
Identical group No.654382 (20 seq.)
>W131162458 AQYX01000174 candidate division OP9 candidate division OP9 bacterium SCGC AAA252-M02 [AQYX] 1576 1650 + Gly GCC [ENA]
>W131193731 ASOX01000020 candidate division OP9 candidate division OP9 bacterium SCGC AB-164-P05 [ASOX] 2197 2271 + Gly GCC [ENA]
>W131193767 ASPA01000029 candidate division OP9 candidate division OP9 bacterium SCGC AAA255-G05 [ASPA] 8014 8088 + Gly GCC [ENA]
>W131203645 ASZL01000006 candidate division OP9 candidate division OP9 bacterium SCGC AB-164-M20 [ASZL] 1576 1650 + Gly GCC [ENA]
>W141139544 AWNT01000010 Atribacteria Atribacteria bacterium JGI OTU-1 [AWNT] 1576 1650 + Gly GCC [ENA]
>WENV170600991 FUWD010151795 [FUWD] metagenome; unknown 520 594 + Gly GCC [ENA]
>WENV170618896 FUWD012991347 [FUWD] metagenome; unknown 726 652 - Gly GCC [ENA]
>WENV170626388 FUWD013221090 [FUWD] metagenome; unknown 1356 1282 - Gly GCC [ENA]
>WENV170695462 LGVE01097978 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 146 72 - Gly GCC [ENA]
>SRA1018715 SRR035082.336875 454 Sequencing (SRP001803) 103 177 + Gly GCC [SRA]
>SRA1026544 SRR035085.224939 454 Sequencing (SRP001806) 170 244 + Gly GCC [SRA]
>SRA1029498 SRR035087.137046 454 Sequencing (SRP001808) 121 195 + Gly GCC [SRA]
>SRA1029966 SRR035087.209149 454 Sequencing (SRP001808) 275 201 - Gly GCC [SRA]
>SRA1031047 SRR035087.364477 454 Sequencing (SRP001808) 17 91 + Gly GCC [SRA]
>SRA1031164 SRR035087.382926 454 Sequencing (SRP001808) 87 161 + Gly GCC [SRA]
>SRA1032365 SRR035087.612587 454 Sequencing (SRP001808) 312 386 + Gly GCC [SRA]
>SRA1032789 SRR035088.103199 454 Sequencing (SRP001809) 158 232 + Gly GCC [SRA]
>SRA1035990 SRR035089.421457 454 Sequencing (SRP001810) 449 523 + Gly GCC [SRA]
>SRA1049957 SRR035095.168237 454 Sequencing (SRP001816) 474 400 - Gly GCC [SRA]
>W1510076779 CDPL01000047 Atribacteria Atribacteria bacterium JGI 0000014-F07 [CDPL] 5784 5858 + Gly GCC [ENA]
Identical group No.654391 (8 seq.)
>WENV170622255 FUWD013094408 [FUWD] metagenome; unknown 1203 1129 - Gly GCC [ENA]
>WENV170630476 FUWD013309143 [FUWD] metagenome; unknown 1203 1129 - Gly GCC [ENA]
>SRA1026615 SRR035085.242322 454 Sequencing (SRP001806) 99 173 + Gly GCC [SRA]
>SRA1030630 SRR035087.307002 454 Sequencing (SRP001808) 71 145 + Gly GCC [SRA]
>SRA1032175 SRR035087.568285 454 Sequencing (SRP001808) 257 331 + Gly GCC [SRA]
>SRA1032367 SRR035087.613066 454 Sequencing (SRP001808) 257 331 + Gly GCC [SRA]
>SRA1036204 SRR035089.470970 454 Sequencing (SRP001810) 89 15 - Gly GCC [SRA]
>SRA1036388 SRR035089.508690 454 Sequencing (SRP001810) 116 42 - Gly GCC [SRA]
Identical group No.654398 (11 seq.)
>WENV170601746 FUWD010191354 [FUWD] metagenome; unknown 514 588 + Gly GCC [ENA]
>WENV170627294 FUWD013232509 [FUWD] metagenome; unknown 1359 1433 + Gly GCC [ENA]
>SRA1017797 SRR035082.197352 454 Sequencing (SRP001803) 88 14 - Gly GCC [SRA]
>SRA1026694 SRR035085.262121 454 Sequencing (SRP001806) 62 136 + Gly GCC [SRA]
>SRA1041884 SRR035091.310269 454 Sequencing (SRP001812) 382 457 + Gly GCC [SRA]
>SRA1042136 SRR035091.344224 454 Sequencing (SRP001812) 20 94 + Gly GCC [SRA]
>SRA1043167 SRR035092.62482 454 Sequencing (SRP001813) 192 266 + Gly GCC [SRA]
>SRA1043832 SRR035092.182353 454 Sequencing (SRP001813) 112 186 + Gly GCC [SRA]
>SRA1044886 SRR035092.366654 454 Sequencing (SRP001813) 288 214 - Gly GCC [SRA]
>SRA1047875 SRR035094.59292 454 Sequencing (SRP001815) 116 42 - Gly GCC [SRA]
>SRA1049449 SRR035095.79463 454 Sequencing (SRP001816) 108 34 - Gly GCC [SRA]
Identical group No.654399 (4 seq.)
>WENV170623252 FUWD013142928 [FUWD] metagenome; unknown 1124 1198 + Gly GCC [ENA]
>WENV170631509 FUWD013355123 [FUWD] metagenome; unknown 1124 1198 + Gly GCC [ENA]
>SRA1017138 SRR035082.87117 454 Sequencing (SRP001803) 346 272 - Gly GCC [SRA]
>SRA1026708 SRR035085.266581 454 Sequencing (SRP001806) 353 427 + Gly GCC [SRA]
Identical group No.654401 (3 seq.)
>WENV170612730 FUWD012672263 [FUWD] metagenome; unknown 148 76 - Gly GCC [ENA]
>SRA1026735 SRR035085.276269 454 Sequencing (SRP001806) 17 89 + Gly GCC [SRA]
>SRA1048031 SRR035094.95885 454 Sequencing (SRP001815) 157 85 - Gly GCC [SRA]
Identical group No.654411 (1 seq.)
>SRA1026826 SRR035085.304690 454 Sequencing (SRP001806) 165 94 - Gly GCC [SRA]
Identical group No.779783 (1 seq.)
>SRA1025606 SRR035085.48433 454 Sequencing (SRP001806) 223 150 - Gly GCC [SRA]
Identical group No.779841 (1 seq.)
>SRA1026509 SRR035085.218295 454 Sequencing (SRP001806) 337 267 - Gly GCC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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