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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001811)
Anticodon = GAA
HIT:
14 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.357985 (2 seq.)
>WENV170608087
FUWD010891840
[FUWD] metagenome; unknown
290
215
-
Phe
GAA
[ENA]
¢þ
>SRA1037407
SRR035090.129492
454 Sequencing (SRP001811)
106
31
-
Phe
GAA
[SRA]
Identical group No.415471 (1 seq.)
>SRA1038769
SRR035090.362729
454 Sequencing (SRP001811)
162
86
-
Phe
GAA
[SRA]
Identical group No.453315 (122 seq.)
>C016758
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
1928123
1928051
-
Phe
GAA
[Ensembl]
¡û
>C018263
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1674367
1674295
-
Phe
GAA
[Ensembl]
¡û
>WENV183812106
PYLN01000044
[PYLN] freshwater metagenome; meromictic lake
10373
10446
+
Phe
GAA
[ENA]
¢þ
>WENV170613774
FUWD012819321
[FUWD] metagenome; unknown
7333
7408
+
Phe
GAA
[ENA]
¢þ
>W09103372
AAJD01000015
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
11248
11321
+
Phe
GAA
[ENA]
¡û
>SRA1019947
SRR035083.27997
454 Sequencing (SRP001804)
208
133
-
Phe
GAA
[SRA]
>SRA1020065
SRR035083.52290
454 Sequencing (SRP001804)
207
132
-
Phe
GAA
[SRA]
>SRA1020201
SRR035083.73831
454 Sequencing (SRP001804)
42
117
+
Phe
GAA
[SRA]
>SRA1020218
SRR035083.75922
454 Sequencing (SRP001804)
287
212
-
Phe
GAA
[SRA]
>SRA1020273
SRR035083.87895
454 Sequencing (SRP001804)
503
428
-
Phe
GAA
[SRA]
>SRA1020360
SRR035083.101891
454 Sequencing (SRP001804)
471
396
-
Phe
GAA
[SRA]
>SRA1020384
SRR035083.105766
454 Sequencing (SRP001804)
151
76
-
Phe
GAA
[SRA]
>SRA1020449
SRR035083.117181
454 Sequencing (SRP001804)
414
489
+
Phe
GAA
[SRA]
>SRA1020464
SRR035083.119139
454 Sequencing (SRP001804)
308
383
+
Phe
GAA
[SRA]
>SRA1020547
SRR035083.133335
454 Sequencing (SRP001804)
309
384
+
Phe
GAA
[SRA]
>SRA1020557
SRR035083.134653
454 Sequencing (SRP001804)
260
185
-
Phe
GAA
[SRA]
>SRA1020566
SRR035083.135862
454 Sequencing (SRP001804)
155
80
-
Phe
GAA
[SRA]
>SRA1020604
SRR035083.139887
454 Sequencing (SRP001804)
434
509
+
Phe
GAA
[SRA]
>SRA1020630
SRR035083.142894
454 Sequencing (SRP001804)
243
318
+
Phe
GAA
[SRA]
>SRA1020643
SRR035083.145692
454 Sequencing (SRP001804)
201
126
-
Phe
GAA
[SRA]
>SRA1020774
SRR035083.162440
454 Sequencing (SRP001804)
86
11
-
Phe
GAA
[SRA]
>SRA1020777
SRR035083.162897
454 Sequencing (SRP001804)
400
475
+
Phe
GAA
[SRA]
>SRA1020876
SRR035083.176904
454 Sequencing (SRP001804)
183
258
+
Phe
GAA
[SRA]
>SRA1020947
SRR035083.189345
454 Sequencing (SRP001804)
323
398
+
Phe
GAA
[SRA]
>SRA1020979
SRR035083.192582
454 Sequencing (SRP001804)
97
22
-
Phe
GAA
[SRA]
>SRA1021015
SRR035083.197801
454 Sequencing (SRP001804)
197
122
-
Phe
GAA
[SRA]
>SRA1021045
SRR035083.203071
454 Sequencing (SRP001804)
278
203
-
Phe
GAA
[SRA]
>SRA1021107
SRR035083.209042
454 Sequencing (SRP001804)
34
109
+
Phe
GAA
[SRA]
>SRA1021308
SRR035083.239611
454 Sequencing (SRP001804)
328
403
+
Phe
GAA
[SRA]
>SRA1021355
SRR035083.247532
454 Sequencing (SRP001804)
42
117
+
Phe
GAA
[SRA]
>SRA1021408
SRR035083.255504
454 Sequencing (SRP001804)
123
48
-
Phe
GAA
[SRA]
>SRA1021480
SRR035083.264244
454 Sequencing (SRP001804)
97
22
-
Phe
GAA
[SRA]
>SRA1021492
SRR035083.265589
454 Sequencing (SRP001804)
155
80
-
Phe
GAA
[SRA]
>SRA1021587
SRR035083.276875
454 Sequencing (SRP001804)
251
176
-
Phe
GAA
[SRA]
>SRA1021626
SRR035083.283484
454 Sequencing (SRP001804)
86
11
-
Phe
GAA
[SRA]
>SRA1021656
SRR035083.287708
454 Sequencing (SRP001804)
242
317
+
Phe
GAA
[SRA]
>SRA1021694
SRR035083.292804
454 Sequencing (SRP001804)
236
161
-
Phe
GAA
[SRA]
>SRA1021702
SRR035083.294785
454 Sequencing (SRP001804)
86
11
-
Phe
GAA
[SRA]
>SRA1021766
SRR035083.306248
454 Sequencing (SRP001804)
327
402
+
Phe
GAA
[SRA]
>SRA1021861
SRR035083.320088
454 Sequencing (SRP001804)
308
233
-
Phe
GAA
[SRA]
>SRA1021990
SRR035083.335149
454 Sequencing (SRP001804)
60
135
+
Phe
GAA
[SRA]
>SRA1022002
SRR035083.337711
454 Sequencing (SRP001804)
186
111
-
Phe
GAA
[SRA]
>SRA1022013
SRR035083.339020
454 Sequencing (SRP001804)
236
161
-
Phe
GAA
[SRA]
>SRA1022135
SRR035083.357469
454 Sequencing (SRP001804)
296
221
-
Phe
GAA
[SRA]
>SRA1022233
SRR035083.371997
454 Sequencing (SRP001804)
220
295
+
Phe
GAA
[SRA]
>SRA1022249
SRR035083.374288
454 Sequencing (SRP001804)
277
202
-
Phe
GAA
[SRA]
>SRA1022325
SRR035083.389579
454 Sequencing (SRP001804)
434
509
+
Phe
GAA
[SRA]
>SRA1022337
SRR035083.391910
454 Sequencing (SRP001804)
243
318
+
Phe
GAA
[SRA]
>SRA1022355
SRR035083.394896
454 Sequencing (SRP001804)
131
56
-
Phe
GAA
[SRA]
>SRA1022378
SRR035083.398364
454 Sequencing (SRP001804)
79
154
+
Phe
GAA
[SRA]
>SRA1022476
SRR035083.411276
454 Sequencing (SRP001804)
362
287
-
Phe
GAA
[SRA]
>SRA1022574
SRR035083.427125
454 Sequencing (SRP001804)
333
258
-
Phe
GAA
[SRA]
>SRA1022613
SRR035083.432741
454 Sequencing (SRP001804)
105
30
-
Phe
GAA
[SRA]
>SRA1022625
SRR035083.434426
454 Sequencing (SRP001804)
118
43
-
Phe
GAA
[SRA]
>SRA1022650
SRR035083.437067
454 Sequencing (SRP001804)
159
84
-
Phe
GAA
[SRA]
>SRA1022695
SRR035083.443360
454 Sequencing (SRP001804)
45
120
+
Phe
GAA
[SRA]
>SRA1022708
SRR035083.445188
454 Sequencing (SRP001804)
231
306
+
Phe
GAA
[SRA]
>SRA1022727
SRR035083.449226
454 Sequencing (SRP001804)
86
11
-
Phe
GAA
[SRA]
>SRA1022734
SRR035083.450416
454 Sequencing (SRP001804)
102
177
+
Phe
GAA
[SRA]
>SRA1022949
SRR035083.493591
454 Sequencing (SRP001804)
218
143
-
Phe
GAA
[SRA]
>SRA1023070
SRR035083.514709
454 Sequencing (SRP001804)
244
169
-
Phe
GAA
[SRA]
>SRA1025933
SRR035085.112918
454 Sequencing (SRP001806)
18
93
+
Phe
GAA
[SRA]
>SRA1026056
SRR035085.133358
454 Sequencing (SRP001806)
18
93
+
Phe
GAA
[SRA]
>SRA1029920
SRR035087.202028
454 Sequencing (SRP001808)
310
385
+
Phe
GAA
[SRA]
>SRA1032640
SRR035088.69605
454 Sequencing (SRP001809)
69
144
+
Phe
GAA
[SRA]
>SRA1032776
SRR035088.101245
454 Sequencing (SRP001809)
307
232
-
Phe
GAA
[SRA]
>SRA1034426
SRR035089.90908
454 Sequencing (SRP001810)
363
288
-
Phe
GAA
[SRA]
>SRA1035521
SRR035089.323342
454 Sequencing (SRP001810)
61
136
+
Phe
GAA
[SRA]
>SRA1035995
SRR035089.423139
454 Sequencing (SRP001810)
370
295
-
Phe
GAA
[SRA]
>SRA1036121
SRR035089.449265
454 Sequencing (SRP001810)
101
26
-
Phe
GAA
[SRA]
>SRA1036995
SRR035090.55232
454 Sequencing (SRP001811)
119
44
-
Phe
GAA
[SRA]
>SRA1037027
SRR035090.61267
454 Sequencing (SRP001811)
171
96
-
Phe
GAA
[SRA]
>SRA1037286
SRR035090.107135
454 Sequencing (SRP001811)
330
255
-
Phe
GAA
[SRA]
>SRA1037497
SRR035090.142878
454 Sequencing (SRP001811)
91
16
-
Phe
GAA
[SRA]
>SRA1037562
SRR035090.155152
454 Sequencing (SRP001811)
109
34
-
Phe
GAA
[SRA]
>SRA1037668
SRR035090.171893
454 Sequencing (SRP001811)
433
358
-
Phe
GAA
[SRA]
>SRA1037737
SRR035090.184655
454 Sequencing (SRP001811)
471
396
-
Phe
GAA
[SRA]
>SRA1037880
SRR035090.211240
454 Sequencing (SRP001811)
203
128
-
Phe
GAA
[SRA]
>SRA1037907
SRR035090.216694
454 Sequencing (SRP001811)
354
429
+
Phe
GAA
[SRA]
>SRA1038184
SRR035090.260299
454 Sequencing (SRP001811)
324
247
-
Phe
GAA
[SRA]
>SRA1038226
SRR035090.267884
454 Sequencing (SRP001811)
208
133
-
Phe
GAA
[SRA]
>SRA1038525
SRR035090.320426
454 Sequencing (SRP001811)
143
218
+
Phe
GAA
[SRA]
>SRA1038611
SRR035090.336370
454 Sequencing (SRP001811)
317
392
+
Phe
GAA
[SRA]
>SRA1038649
SRR035090.343745
454 Sequencing (SRP001811)
187
262
+
Phe
GAA
[SRA]
>SRA1038704
SRR035090.352403
454 Sequencing (SRP001811)
151
226
+
Phe
GAA
[SRA]
>SRA1038761
SRR035090.361483
454 Sequencing (SRP001811)
462
387
-
Phe
GAA
[SRA]
>SRA1038789
SRR035090.366438
454 Sequencing (SRP001811)
157
232
+
Phe
GAA
[SRA]
>SRA1038822
SRR035090.373769
454 Sequencing (SRP001811)
111
186
+
Phe
GAA
[SRA]
>SRA1038895
SRR035090.389869
454 Sequencing (SRP001811)
175
250
+
Phe
GAA
[SRA]
>SRA1038919
SRR035090.394208
454 Sequencing (SRP001811)
206
281
+
Phe
GAA
[SRA]
>SRA1039079
SRR035090.420824
454 Sequencing (SRP001811)
106
181
+
Phe
GAA
[SRA]
>SRA1039168
SRR035090.436408
454 Sequencing (SRP001811)
71
146
+
Phe
GAA
[SRA]
>SRA1039299
SRR035090.461198
454 Sequencing (SRP001811)
93
168
+
Phe
GAA
[SRA]
>SRA1039383
SRR035090.481079
454 Sequencing (SRP001811)
112
187
+
Phe
GAA
[SRA]
>SRA1039391
SRR035090.482841
454 Sequencing (SRP001811)
206
281
+
Phe
GAA
[SRA]
>SRA1039397
SRR035090.483093
454 Sequencing (SRP001811)
247
172
-
Phe
GAA
[SRA]
>SRA1039489
SRR035090.502171
454 Sequencing (SRP001811)
139
64
-
Phe
GAA
[SRA]
>SRA1039521
SRR035090.508076
454 Sequencing (SRP001811)
368
293
-
Phe
GAA
[SRA]
>SRA1039522
SRR035090.508224
454 Sequencing (SRP001811)
135
210
+
Phe
GAA
[SRA]
>SRA1039643
SRR035090.535175
454 Sequencing (SRP001811)
441
366
-
Phe
GAA
[SRA]
>SRA1039664
SRR035090.538678
454 Sequencing (SRP001811)
175
250
+
Phe
GAA
[SRA]
>SRA1039683
SRR035090.543914
454 Sequencing (SRP001811)
227
152
-
Phe
GAA
[SRA]
>SRA1039892
SRR035090.594701
454 Sequencing (SRP001811)
241
166
-
Phe
GAA
[SRA]
>SRA1041221
SRR035091.215780
454 Sequencing (SRP001812)
124
199
+
Phe
GAA
[SRA]
>SRA1041751
SRR035091.287911
454 Sequencing (SRP001812)
138
213
+
Phe
GAA
[SRA]
>SRA1041825
SRR035091.300116
454 Sequencing (SRP001812)
161
236
+
Phe
GAA
[SRA]
>SRA1042389
SRR035091.380992
454 Sequencing (SRP001812)
437
362
-
Phe
GAA
[SRA]
>SRA1045272
SRR035093.49759
454 Sequencing (SRP001814)
308
383
+
Phe
GAA
[SRA]
>SRA1049333
SRR035095.58457
454 Sequencing (SRP001816)
336
261
-
Phe
GAA
[SRA]
>SRA1053208
SRR035098.361735
454 Sequencing (SRP001819)
397
472
+
Phe
GAA
[SRA]
>SRA1053972
SRR035099.21362
454 Sequencing (SRP001820)
25
100
+
Phe
GAA
[SRA]
>SRA1054043
SRR035099.41951
454 Sequencing (SRP001820)
104
29
-
Phe
GAA
[SRA]
>SRA1054077
SRR035099.52192
454 Sequencing (SRP001820)
183
258
+
Phe
GAA
[SRA]
>SRA1054132
SRR035099.66622
454 Sequencing (SRP001820)
208
283
+
Phe
GAA
[SRA]
>SRA1054169
SRR035099.74633
454 Sequencing (SRP001820)
433
358
-
Phe
GAA
[SRA]
>SRA1054257
SRR035099.93410
454 Sequencing (SRP001820)
202
127
-
Phe
GAA
[SRA]
>SRA1054262
SRR035099.94325
454 Sequencing (SRP001820)
240
165
-
Phe
GAA
[SRA]
>SRA1054289
SRR035099.100372
454 Sequencing (SRP001820)
240
165
-
Phe
GAA
[SRA]
>SRA1054295
SRR035099.100857
454 Sequencing (SRP001820)
104
29
-
Phe
GAA
[SRA]
>SRA1054464
SRR035099.138429
454 Sequencing (SRP001820)
220
295
+
Phe
GAA
[SRA]
>SRA1054490
SRR035099.145793
454 Sequencing (SRP001820)
104
29
-
Phe
GAA
[SRA]
>SRA1054783
SRR035099.211829
454 Sequencing (SRP001820)
360
285
-
Phe
GAA
[SRA]
Identical group No.458079 (54 seq.)
>W1711317451
MAXH01000069
Thermodesulfobacteriota
Desulfobulbaceae bacterium S3730MH12 [MAXH]
20757
20682
-
Phe
GAA
[ENA]
¡û
>W1711317567
MAXK01000106
Thermodesulfobacteriota
Desulfobulbaceae bacterium S5133MH15 [MAXK]
2791
2866
+
Phe
GAA
[ENA]
¡û
>W1711317719
MAXQ01000210
Thermodesulfobacteriota
Desulfobulbaceae bacterium C00003063 [MAXQ]
9450
9375
-
Phe
GAA
[ENA]
¡û
>W1711662181
MQUF01000003
Thermodesulfobacteriota
Desulfobulbaceae bacterium DB1 [MQUF]
345516
345591
+
Phe
GAA
[ENA]
¡û
>C007906
CR522870
Thermodesulfobacteriota
Desulfotalea psychrophila LSv54 [CR522870]
2024869
2024794
-
Phe
GAA
[Ensembl]
¡û
>C007907
CR522870
Thermodesulfobacteriota
Desulfotalea psychrophila LSv54 [CR522870]
2009564
2009489
-
Phe
GAA
[Ensembl]
¡û
>WENV180042202
LNFX01004374
[LNFX] marine sediment metagenome; antarctic beach sand mud
246
171
-
Phe
GAA
[ENA]
¢þ
>WENV180287491
OBIK01082907
[OBIK] hydrothermal vent metagenome; sea water
17
92
+
Phe
GAA
[ENA]
¢þ
>WENV180386678
OBPC01054065
[OBPC] marine metagenome; Sterile flask
201
126
-
Phe
GAA
[ENA]
¢þ
>WENV183704448
PDWI01000248
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
43828
43753
-
Phe
GAA
[ENA]
¢þ
>WENV183704457
PDWI01000267
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5386
5311
-
Phe
GAA
[ENA]
¢þ
>WENV183704871
PDWI01000712
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
12864
12789
-
Phe
GAA
[ENA]
¢þ
>WENV183707478
PDWI01008629
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
10212
10287
+
Phe
GAA
[ENA]
¢þ
>WENV183708156
PDWI01013432
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1551
1476
-
Phe
GAA
[ENA]
¢þ
>WENV183709339
PDWI01027095
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5319
5244
-
Phe
GAA
[ENA]
¢þ
>WENV183710328
PDWI01044321
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3583
3658
+
Phe
GAA
[ENA]
¢þ
>WENV183710477
PDWI01047418
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
22
97
+
Phe
GAA
[ENA]
¢þ
>WENV183711306
PDWI01065913
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3253
3328
+
Phe
GAA
[ENA]
¢þ
>WENV183711612
PDWI01074663
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1686
1761
+
Phe
GAA
[ENA]
¢þ
>WENV183711697
PDWI01077150
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3410
3335
-
Phe
GAA
[ENA]
¢þ
>WENV183711751
PDWI01078985
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
831
906
+
Phe
GAA
[ENA]
¢þ
>WENV183711833
PDWI01081771
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1311
1386
+
Phe
GAA
[ENA]
¢þ
>WENV183712883
PDWI01117651
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2193
2266
+
Phe
GAA
[ENA]
¢þ
>WENV183714060
PDWI01165864
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
18
93
+
Phe
GAA
[ENA]
¢þ
>WENV183715890
PDWI01270946
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
23
98
+
Phe
GAA
[ENA]
¢þ
>WENV183716547
PDWJ01000044
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
44336
44411
+
Phe
GAA
[ENA]
¢þ
>WENV183716646
PDWJ01000102
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
78930
78855
-
Phe
GAA
[ENA]
¢þ
>WENV183719037
PDWJ01009062
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
3372
3297
-
Phe
GAA
[ENA]
¢þ
>WENV183719126
PDWJ01009971
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
1309
1234
-
Phe
GAA
[ENA]
¢þ
>WENV183719127
PDWJ01009971
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
1091
1016
-
Phe
GAA
[ENA]
¢þ
>WENV183719423
PDWJ01013969
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
5319
5244
-
Phe
GAA
[ENA]
¢þ
>WENV183719846
PDWJ01021603
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
3930
3855
-
Phe
GAA
[ENA]
¢þ
>WENV183720115
PDWJ01026812
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
81
6
-
Phe
GAA
[ENA]
¢þ
>WENV183720638
PDWJ01040277
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
2425
2500
+
Phe
GAA
[ENA]
¢þ
>WENV183721403
PDWJ01067660
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
24
99
+
Phe
GAA
[ENA]
¢þ
>WENV183721543
PDWJ01074587
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
699
624
-
Phe
GAA
[ENA]
¢þ
>WENV183721911
PDWJ01094090
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
1293
1218
-
Phe
GAA
[ENA]
¢þ
>WENV183746891
PPCM01000034
[PPCM] marine sediment metagenome; marine sediment
256037
256112
+
Phe
GAA
[ENA]
¢þ
>WENV170006635
AMWB02038588
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
2158
2233
+
Phe
GAA
[ENA]
¢þ
>WENV170007742
AMWB02154863
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
21353
21278
-
Phe
GAA
[ENA]
¢þ
>WENV170602357
FUWD010230486
[FUWD] metagenome; unknown
352
277
-
Phe
GAA
[ENA]
¢þ
>WENV170622217
FUWD013093260
[FUWD] metagenome; unknown
1033
1108
+
Phe
GAA
[ENA]
¢þ
>WENV170630420
FUWD013308136
[FUWD] metagenome; unknown
1033
1108
+
Phe
GAA
[ENA]
¢þ
>WENV170642866
JFJP01046275
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
5
80
+
Phe
GAA
[ENA]
¢þ
>WENV170647020
JQIA01008277
[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
3727
3802
+
Phe
GAA
[ENA]
¢þ
>WENV170696504
LGVF01022793
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
9450
9375
-
Phe
GAA
[ENA]
¢þ
>WENV170894383
MDTD01064587
[MDTD] marine metagenome; seawater
1917
1992
+
Phe
GAA
[ENA]
¢þ
>SRA1039340
SRR035090.472834
454 Sequencing (SRP001811)
318
393
+
Phe
GAA
[SRA]
>SRA1054227
SRR035099.86903
454 Sequencing (SRP001820)
114
189
+
Phe
GAA
[SRA]
>SRA1054240
SRR035099.90777
454 Sequencing (SRP001820)
376
301
-
Phe
GAA
[SRA]
>SRA1054509
SRR035099.150021
454 Sequencing (SRP001820)
173
248
+
Phe
GAA
[SRA]
>C131010912
CP003985
Thermodesulfobacteriota
Desulfocapsa sulfexigens DSM 10523 [CP003985]
218391
218316
-
Phe
GAA
[Ensembl]
¡û
>W1710525197
FNJI01000021
Thermodesulfobacteriota
Desulforhopalus singaporensis [FNJI]
68525
68600
+
Phe
GAA
[ENA]
¡û
>W1710593702
FRFE01000028
Thermodesulfobacteriota
Desulfopila aestuarii DSM 18488 [FRFE]
48832
48907
+
Phe
GAA
[ENA]
¡û
Identical group No.484350 (4 seq.)
>WENV170607936
FUWD010872829
[FUWD] metagenome; unknown
252
327
+
Phe
GAA
[ENA]
¢þ
>SRA1030794
SRR035087.332389
454 Sequencing (SRP001808)
305
380
+
Phe
GAA
[SRA]
>SRA1032646
SRR035088.70635
454 Sequencing (SRP001809)
422
497
+
Phe
GAA
[SRA]
>SRA1038985
SRR035090.403756
454 Sequencing (SRP001811)
161
86
-
Phe
GAA
[SRA]
Identical group No.500001 (6 seq.)
>WENV183513170
OMKS01003029
[OMKS] sediment metagenome; hot spring sediment
13611
13536
-
Phe
GAA
[ENA]
¢þ
>WENV170606118
FUWD010613549
[FUWD] metagenome; unknown
514
439
-
Phe
GAA
[ENA]
¢þ
>WENV170608086
FUWD010891650
[FUWD] metagenome; unknown
557
482
-
Phe
GAA
[ENA]
¢þ
>SRA1039212
SRR035090.445511
454 Sequencing (SRP001811)
278
203
-
Phe
GAA
[SRA]
>W10123422
ADZZ01000016
Unclassified
delta proteobacterium NaphS2 [ADZZ]
38596
38671
+
Phe
GAA
[ENA]
¡û
>W11130220
ADZZ01000016
Unclassified
delta proteobacterium NaphS2 [ADZZ]
38596
38671
+
Phe
GAA
[ENA]
¡û
Identical group No.548614 (4 seq.)
>WENV170618820
FUWD012988203
[FUWD] metagenome; unknown
3
78
+
Phe
GAA
[ENA]
¢þ
>SRA1038911
SRR035090.392902
454 Sequencing (SRP001811)
295
220
-
Phe
GAA
[SRA]
>SRA1038980
SRR035090.402943
454 Sequencing (SRP001811)
295
220
-
Phe
GAA
[SRA]
>SRA1039897
SRR035090.596389
454 Sequencing (SRP001811)
296
221
-
Phe
GAA
[SRA]
Identical group No.573685 (2 seq.)
>SRA1037299
SRR035090.109637
454 Sequencing (SRP001811)
156
81
-
Phe
GAA
[SRA]
>SRA1042624
SRR035091.418197
454 Sequencing (SRP001812)
152
77
-
Phe
GAA
[SRA]
Identical group No.612440 (1 seq.)
>SRA1037449
SRR035090.136641
454 Sequencing (SRP001811)
193
120
-
Phe
GAA
[SRA]
Identical group No.612456 (1 seq.)
>SRA1038195
SRR035090.262484
454 Sequencing (SRP001811)
384
309
-
Phe
GAA
[SRA]
Identical group No.612457 (1 seq.)
>SRA1038224
SRR035090.267858
454 Sequencing (SRP001811)
365
290
-
Phe
GAA
[SRA]
Identical group No.612468 (1 seq.)
>SRA1038636
SRR035090.340857
454 Sequencing (SRP001811)
501
426
-
Phe
GAA
[SRA]
Identical group No.686043 (3 seq.)
>WENV170612381
FUWD012594487
[FUWD] metagenome; unknown
75
1
-
Phe
GAA
[ENA]
¢þ
>SRA1038957
SRR035090.400585
454 Sequencing (SRP001811)
222
148
-
Phe
GAA
[SRA]
>SRA1054035
SRR035099.38959
454 Sequencing (SRP001820)
94
20
-
Phe
GAA
[SRA]
Identical group No.710771 (5 seq.)
>WENV170607704
FUWD010850465
[FUWD] metagenome; unknown
359
431
+
Phe
GAA
[ENA]
¢þ
>SRA1018665
SRR035082.330080
454 Sequencing (SRP001803)
359
431
+
Phe
GAA
[SRA]
>SRA1039520
SRR035090.508046
454 Sequencing (SRP001811)
334
262
-
Phe
GAA
[SRA]
>SRA1041055
SRR035091.188540
454 Sequencing (SRP001812)
150
222
+
Phe
GAA
[SRA]
>SRA1050286
SRR035095.231229
454 Sequencing (SRP001816)
190
262
+
Phe
GAA
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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