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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001813)
Anticodon = GTC
HIT:
56 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237683 (1 seq.)
>SRA1043275
SRR035092.87445
454 Sequencing (SRP001813)
316
392
+
Asp
GTC
[SRA]
Identical group No.237696 (2 seq.)
>SRA1018741
SRR035082.341402
454 Sequencing (SRP001803)
261
183
-
Asp
GTC
[SRA]
>SRA1044753
SRR035092.333640
454 Sequencing (SRP001813)
178
100
-
Asp
GTC
[SRA]
Identical group No.237702 (1 seq.)
>SRA1044976
SRR035092.383841
454 Sequencing (SRP001813)
135
211
+
Asp
GTC
[SRA]
Identical group No.240800 (149 seq.)
>W1711167337
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
>C007027
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
1738672
1738746
+
Asp
GTC
[Ensembl]
¡û
>C016774
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
346020
345943
-
Asp
GTC
[Ensembl]
¡û
>C018279
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
411488
411414
-
Asp
GTC
[Ensembl]
¡û
>WENV183812122
PYLN01000144
[PYLN] freshwater metagenome; meromictic lake
222
147
-
Asp
GTC
[ENA]
¢þ
>WENV170613645
FUWD012815655
[FUWD] metagenome; unknown
5193
5118
-
Asp
GTC
[ENA]
¢þ
>WENV170613670
FUWD012816158
[FUWD] metagenome; unknown
86170
86093
-
Asp
GTC
[ENA]
¢þ
>W09103343
AAJD01000002
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
108316
108241
-
Asp
GTC
[ENA]
¡û
>SRA1019934
SRR035083.24761
454 Sequencing (SRP001804)
400
325
-
Asp
GTC
[SRA]
>SRA1020025
SRR035083.43241
454 Sequencing (SRP001804)
454
379
-
Asp
GTC
[SRA]
>SRA1020063
SRR035083.52094
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020111
SRR035083.58815
454 Sequencing (SRP001804)
248
173
-
Asp
GTC
[SRA]
>SRA1020167
SRR035083.65552
454 Sequencing (SRP001804)
301
226
-
Asp
GTC
[SRA]
>SRA1020332
SRR035083.98284
454 Sequencing (SRP001804)
304
379
+
Asp
GTC
[SRA]
>SRA1020347
SRR035083.100193
454 Sequencing (SRP001804)
171
246
+
Asp
GTC
[SRA]
>SRA1020388
SRR035083.106350
454 Sequencing (SRP001804)
242
167
-
Asp
GTC
[SRA]
>SRA1020493
SRR035083.122765
454 Sequencing (SRP001804)
243
168
-
Asp
GTC
[SRA]
>SRA1020530
SRR035083.130798
454 Sequencing (SRP001804)
393
318
-
Asp
GTC
[SRA]
>SRA1020733
SRR035083.157159
454 Sequencing (SRP001804)
125
200
+
Asp
GTC
[SRA]
>SRA1020860
SRR035083.174137
454 Sequencing (SRP001804)
88
163
+
Asp
GTC
[SRA]
>SRA1020882
SRR035083.178769
454 Sequencing (SRP001804)
292
217
-
Asp
GTC
[SRA]
>SRA1020943
SRR035083.188993
454 Sequencing (SRP001804)
156
231
+
Asp
GTC
[SRA]
>SRA1020953
SRR035083.190022
454 Sequencing (SRP001804)
486
411
-
Asp
GTC
[SRA]
>SRA1021302
SRR035083.239188
454 Sequencing (SRP001804)
184
109
-
Asp
GTC
[SRA]
>SRA1021314
SRR035083.240922
454 Sequencing (SRP001804)
346
421
+
Asp
GTC
[SRA]
>SRA1021317
SRR035083.241534
454 Sequencing (SRP001804)
327
402
+
Asp
GTC
[SRA]
>SRA1021407
SRR035083.255451
454 Sequencing (SRP001804)
128
203
+
Asp
GTC
[SRA]
>SRA1021446
SRR035083.260093
454 Sequencing (SRP001804)
319
394
+
Asp
GTC
[SRA]
>SRA1021512
SRR035083.268186
454 Sequencing (SRP001804)
73
148
+
Asp
GTC
[SRA]
>SRA1021555
SRR035083.272582
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1021584
SRR035083.276559
454 Sequencing (SRP001804)
234
309
+
Asp
GTC
[SRA]
>SRA1021637
SRR035083.284211
454 Sequencing (SRP001804)
347
422
+
Asp
GTC
[SRA]
>SRA1021639
SRR035083.284610
454 Sequencing (SRP001804)
185
110
-
Asp
GTC
[SRA]
>SRA1021728
SRR035083.297966
454 Sequencing (SRP001804)
38
113
+
Asp
GTC
[SRA]
>SRA1021742
SRR035083.300628
454 Sequencing (SRP001804)
238
313
+
Asp
GTC
[SRA]
>SRA1021869
SRR035083.321391
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1021894
SRR035083.326026
454 Sequencing (SRP001804)
79
154
+
Asp
GTC
[SRA]
>SRA1022171
SRR035083.363552
454 Sequencing (SRP001804)
67
142
+
Asp
GTC
[SRA]
>SRA1022240
SRR035083.373215
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022324
SRR035083.389465
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022328
SRR035083.390297
454 Sequencing (SRP001804)
101
26
-
Asp
GTC
[SRA]
>SRA1022451
SRR035083.406456
454 Sequencing (SRP001804)
175
250
+
Asp
GTC
[SRA]
>SRA1022500
SRR035083.414526
454 Sequencing (SRP001804)
195
120
-
Asp
GTC
[SRA]
>SRA1022523
SRR035083.420317
454 Sequencing (SRP001804)
255
180
-
Asp
GTC
[SRA]
>SRA1022551
SRR035083.423132
454 Sequencing (SRP001804)
274
349
+
Asp
GTC
[SRA]
>SRA1022599
SRR035083.430412
454 Sequencing (SRP001804)
57
132
+
Asp
GTC
[SRA]
>SRA1022761
SRR035083.455418
454 Sequencing (SRP001804)
137
62
-
Asp
GTC
[SRA]
>SRA1022778
SRR035083.459111
454 Sequencing (SRP001804)
106
31
-
Asp
GTC
[SRA]
>SRA1022824
SRR035083.467817
454 Sequencing (SRP001804)
312
390
+
Asp
GTC
[SRA]
>SRA1022863
SRR035083.475224
454 Sequencing (SRP001804)
196
121
-
Asp
GTC
[SRA]
>SRA1022891
SRR035083.479429
454 Sequencing (SRP001804)
50
125
+
Asp
GTC
[SRA]
>SRA1022904
SRR035083.483362
454 Sequencing (SRP001804)
135
58
-
Asp
GTC
[SRA]
>SRA1022987
SRR035083.500401
454 Sequencing (SRP001804)
170
95
-
Asp
GTC
[SRA]
>SRA1023053
SRR035083.512485
454 Sequencing (SRP001804)
282
357
+
Asp
GTC
[SRA]
>SRA1023059
SRR035083.513418
454 Sequencing (SRP001804)
247
170
-
Asp
GTC
[SRA]
>SRA1025849
SRR035085.94086
454 Sequencing (SRP001806)
87
10
-
Asp
GTC
[SRA]
>SRA1029199
SRR035087.91266
454 Sequencing (SRP001808)
254
179
-
Asp
GTC
[SRA]
>SRA1032606
SRR035088.61214
454 Sequencing (SRP001809)
182
107
-
Asp
GTC
[SRA]
>SRA1032704
SRR035088.82623
454 Sequencing (SRP001809)
192
267
+
Asp
GTC
[SRA]
>SRA1032803
SRR035088.106465
454 Sequencing (SRP001809)
354
279
-
Asp
GTC
[SRA]
>SRA1033033
SRR035088.155693
454 Sequencing (SRP001809)
261
186
-
Asp
GTC
[SRA]
>SRA1033118
SRR035088.178281
454 Sequencing (SRP001809)
481
406
-
Asp
GTC
[SRA]
>SRA1033341
SRR035088.230067
454 Sequencing (SRP001809)
162
237
+
Asp
GTC
[SRA]
>SRA1034527
SRR035089.116170
454 Sequencing (SRP001810)
187
112
-
Asp
GTC
[SRA]
>SRA1034615
SRR035089.137419
454 Sequencing (SRP001810)
345
270
-
Asp
GTC
[SRA]
>SRA1034642
SRR035089.142754
454 Sequencing (SRP001810)
291
216
-
Asp
GTC
[SRA]
>SRA1034767
SRR035089.169206
454 Sequencing (SRP001810)
140
65
-
Asp
GTC
[SRA]
>SRA1035029
SRR035089.222057
454 Sequencing (SRP001810)
397
322
-
Asp
GTC
[SRA]
>SRA1036037
SRR035089.431527
454 Sequencing (SRP001810)
155
80
-
Asp
GTC
[SRA]
>SRA1036829
SRR035090.19063
454 Sequencing (SRP001811)
361
286
-
Asp
GTC
[SRA]
>SRA1036864
SRR035090.28459
454 Sequencing (SRP001811)
228
151
-
Asp
GTC
[SRA]
>SRA1036866
SRR035090.28943
454 Sequencing (SRP001811)
64
139
+
Asp
GTC
[SRA]
>SRA1036894
SRR035090.32921
454 Sequencing (SRP001811)
230
155
-
Asp
GTC
[SRA]
>SRA1036935
SRR035090.40975
454 Sequencing (SRP001811)
182
107
-
Asp
GTC
[SRA]
>SRA1036942
SRR035090.42725
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037047
SRR035090.64099
454 Sequencing (SRP001811)
360
285
-
Asp
GTC
[SRA]
>SRA1037145
SRR035090.81771
454 Sequencing (SRP001811)
232
307
+
Asp
GTC
[SRA]
>SRA1037173
SRR035090.87426
454 Sequencing (SRP001811)
227
302
+
Asp
GTC
[SRA]
>SRA1037196
SRR035090.91612
454 Sequencing (SRP001811)
118
193
+
Asp
GTC
[SRA]
>SRA1037278
SRR035090.106437
454 Sequencing (SRP001811)
113
38
-
Asp
GTC
[SRA]
>SRA1037294
SRR035090.108192
454 Sequencing (SRP001811)
304
229
-
Asp
GTC
[SRA]
>SRA1037396
SRR035090.128018
454 Sequencing (SRP001811)
358
433
+
Asp
GTC
[SRA]
>SRA1037459
SRR035090.137643
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1037462
SRR035090.138036
454 Sequencing (SRP001811)
130
55
-
Asp
GTC
[SRA]
>SRA1037464
SRR035090.138069
454 Sequencing (SRP001811)
228
153
-
Asp
GTC
[SRA]
>SRA1037516
SRR035090.145033
454 Sequencing (SRP001811)
171
246
+
Asp
GTC
[SRA]
>SRA1037559
SRR035090.154830
454 Sequencing (SRP001811)
327
252
-
Asp
GTC
[SRA]
>SRA1037592
SRR035090.159927
454 Sequencing (SRP001811)
294
219
-
Asp
GTC
[SRA]
>SRA1037604
SRR035090.162284
454 Sequencing (SRP001811)
161
86
-
Asp
GTC
[SRA]
>SRA1037710
SRR035090.178084
454 Sequencing (SRP001811)
81
6
-
Asp
GTC
[SRA]
>SRA1037739
SRR035090.185071
454 Sequencing (SRP001811)
330
405
+
Asp
GTC
[SRA]
>SRA1037854
SRR035090.204806
454 Sequencing (SRP001811)
431
506
+
Asp
GTC
[SRA]
>SRA1037885
SRR035090.211749
454 Sequencing (SRP001811)
173
248
+
Asp
GTC
[SRA]
>SRA1037913
SRR035090.217673
454 Sequencing (SRP001811)
385
310
-
Asp
GTC
[SRA]
>SRA1037915
SRR035090.217808
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1037997
SRR035090.231383
454 Sequencing (SRP001811)
242
167
-
Asp
GTC
[SRA]
>SRA1038001
SRR035090.232353
454 Sequencing (SRP001811)
101
26
-
Asp
GTC
[SRA]
>SRA1038065
SRR035090.241351
454 Sequencing (SRP001811)
346
271
-
Asp
GTC
[SRA]
>SRA1038122
SRR035090.249420
454 Sequencing (SRP001811)
189
114
-
Asp
GTC
[SRA]
>SRA1038146
SRR035090.254319
454 Sequencing (SRP001811)
337
412
+
Asp
GTC
[SRA]
>SRA1038168
SRR035090.257759
454 Sequencing (SRP001811)
277
352
+
Asp
GTC
[SRA]
>SRA1038188
SRR035090.260734
454 Sequencing (SRP001811)
217
292
+
Asp
GTC
[SRA]
>SRA1038264
SRR035090.276513
454 Sequencing (SRP001811)
372
297
-
Asp
GTC
[SRA]
>SRA1038288
SRR035090.280359
454 Sequencing (SRP001811)
246
171
-
Asp
GTC
[SRA]
>SRA1038306
SRR035090.284671
454 Sequencing (SRP001811)
349
274
-
Asp
GTC
[SRA]
>SRA1038507
SRR035090.317894
454 Sequencing (SRP001811)
280
355
+
Asp
GTC
[SRA]
>SRA1038567
SRR035090.328306
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038642
SRR035090.342220
454 Sequencing (SRP001811)
201
126
-
Asp
GTC
[SRA]
>SRA1038687
SRR035090.350196
454 Sequencing (SRP001811)
343
418
+
Asp
GTC
[SRA]
>SRA1038699
SRR035090.351723
454 Sequencing (SRP001811)
344
419
+
Asp
GTC
[SRA]
>SRA1038722
SRR035090.354561
454 Sequencing (SRP001811)
209
134
-
Asp
GTC
[SRA]
>SRA1038747
SRR035090.359227
454 Sequencing (SRP001811)
56
131
+
Asp
GTC
[SRA]
>SRA1038753
SRR035090.360194
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1038775
SRR035090.363836
454 Sequencing (SRP001811)
318
243
-
Asp
GTC
[SRA]
>SRA1038854
SRR035090.380403
454 Sequencing (SRP001811)
260
185
-
Asp
GTC
[SRA]
>SRA1038855
SRR035090.381107
454 Sequencing (SRP001811)
379
454
+
Asp
GTC
[SRA]
>SRA1038889
SRR035090.388971
454 Sequencing (SRP001811)
267
192
-
Asp
GTC
[SRA]
>SRA1038896
SRR035090.390215
454 Sequencing (SRP001811)
171
96
-
Asp
GTC
[SRA]
>SRA1038910
SRR035090.392403
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1038955
SRR035090.400252
454 Sequencing (SRP001811)
57
132
+
Asp
GTC
[SRA]
>SRA1038962
SRR035090.401275
454 Sequencing (SRP001811)
292
367
+
Asp
GTC
[SRA]
>SRA1038989
SRR035090.404327
454 Sequencing (SRP001811)
169
244
+
Asp
GTC
[SRA]
>SRA1039208
SRR035090.443589
454 Sequencing (SRP001811)
144
221
+
Asp
GTC
[SRA]
>SRA1039211
SRR035090.445157
454 Sequencing (SRP001811)
263
188
-
Asp
GTC
[SRA]
>SRA1039215
SRR035090.445866
454 Sequencing (SRP001811)
204
129
-
Asp
GTC
[SRA]
>SRA1039243
SRR035090.450250
454 Sequencing (SRP001811)
233
308
+
Asp
GTC
[SRA]
>SRA1039268
SRR035090.455081
454 Sequencing (SRP001811)
282
357
+
Asp
GTC
[SRA]
>SRA1039359
SRR035090.477166
454 Sequencing (SRP001811)
58
133
+
Asp
GTC
[SRA]
>SRA1039455
SRR035090.496071
454 Sequencing (SRP001811)
369
294
-
Asp
GTC
[SRA]
>SRA1039582
SRR035090.520322
454 Sequencing (SRP001811)
86
161
+
Asp
GTC
[SRA]
>SRA1039637
SRR035090.534263
454 Sequencing (SRP001811)
345
270
-
Asp
GTC
[SRA]
>SRA1039771
SRR035090.565874
454 Sequencing (SRP001811)
25
100
+
Asp
GTC
[SRA]
>SRA1039927
SRR035090.605288
454 Sequencing (SRP001811)
199
124
-
Asp
GTC
[SRA]
>SRA1039953
SRR035090.612556
454 Sequencing (SRP001811)
11
86
+
Asp
GTC
[SRA]
>SRA1043070
SRR035092.36134
454 Sequencing (SRP001813)
436
361
-
Asp
GTC
[SRA]
>SRA1043611
SRR035092.148490
454 Sequencing (SRP001813)
439
364
-
Asp
GTC
[SRA]
>SRA1045659
SRR035093.142692
454 Sequencing (SRP001814)
76
-1
-
Asp
GTC
[SRA]
>SRA1045961
SRR035093.206390
454 Sequencing (SRP001814)
248
173
-
Asp
GTC
[SRA]
>SRA1046134
SRR035093.243331
454 Sequencing (SRP001814)
222
147
-
Asp
GTC
[SRA]
>SRA1047223
SRR035093.487213
454 Sequencing (SRP001814)
27
102
+
Asp
GTC
[SRA]
>SRA1047814
SRR035094.46168
454 Sequencing (SRP001815)
257
182
-
Asp
GTC
[SRA]
>SRA1049746
SRR035095.132103
454 Sequencing (SRP001816)
235
160
-
Asp
GTC
[SRA]
>SRA1049753
SRR035095.134575
454 Sequencing (SRP001816)
376
301
-
Asp
GTC
[SRA]
>SRA1054286
SRR035099.100189
454 Sequencing (SRP001820)
100
25
-
Asp
GTC
[SRA]
>SRA1054345
SRR035099.111395
454 Sequencing (SRP001820)
195
120
-
Asp
GTC
[SRA]
>SRA1054366
SRR035099.116255
454 Sequencing (SRP001820)
303
228
-
Asp
GTC
[SRA]
>SRA1054588
SRR035099.169159
454 Sequencing (SRP001820)
66
141
+
Asp
GTC
[SRA]
>SRA1054693
SRR035099.189538
454 Sequencing (SRP001820)
343
268
-
Asp
GTC
[SRA]
>W1610977668
LVWG01000036
Chlorobiota
Pelodictyon luteolum [LVWG]
120132
120055
-
Asp
GTC
[ENA]
¡û
Identical group No.244529 (5 seq.)
>WENV170623261
FUWD013143221
[FUWD] metagenome; unknown
1089
1164
+
Asp
GTC
[ENA]
¢þ
>WENV170631520
FUWD013355394
[FUWD] metagenome; unknown
1089
1164
+
Asp
GTC
[ENA]
¢þ
>SRA1031580
SRR035087.453504
454 Sequencing (SRP001808)
171
246
+
Asp
GTC
[SRA]
>SRA1044189
SRR035092.238930
454 Sequencing (SRP001813)
195
270
+
Asp
GTC
[SRA]
>SRA1049906
SRR035095.157885
454 Sequencing (SRP001816)
257
182
-
Asp
GTC
[SRA]
Identical group No.244554 (3 seq.)
>WENV170605111
FUWD010450153
[FUWD] metagenome; unknown
371
448
+
Asp
GTC
[ENA]
¢þ
>SRA1032076
SRR035087.546423
454 Sequencing (SRP001808)
371
448
+
Asp
GTC
[SRA]
>SRA1044756
SRR035092.334453
454 Sequencing (SRP001813)
199
276
+
Asp
GTC
[SRA]
Identical group No.256232 (1 seq.)
>SRA1043115
SRR035092.50575
454 Sequencing (SRP001813)
217
294
+
Asp
GTC
[SRA]
Identical group No.256257 (2 seq.)
>SRA1016836
SRR035082.39173
454 Sequencing (SRP001803)
160
237
+
Asp
GTC
[SRA]
>SRA1044006
SRR035092.209093
454 Sequencing (SRP001813)
258
335
+
Asp
GTC
[SRA]
Identical group No.256274 (1 seq.)
>SRA1044432
SRR035092.279400
454 Sequencing (SRP001813)
446
369
-
Asp
GTC
[SRA]
Identical group No.256275 (1 seq.)
>SRA1044440
SRR035092.280026
454 Sequencing (SRP001813)
78
157
+
Asp
GTC
[SRA]
Identical group No.256276 (1 seq.)
>SRA1044449
SRR035092.281861
454 Sequencing (SRP001813)
167
90
-
Asp
GTC
[SRA]
Identical group No.272249 (8 seq.)
>WENV170601740
FUWD010191274
[FUWD] metagenome; unknown
732
656
-
Asp
GTC
[ENA]
¢þ
>WENV170626888
FUWD013229979
[FUWD] metagenome; unknown
20424
20350
-
Asp
GTC
[ENA]
¢þ
>SRA1017715
SRR035082.184465
454 Sequencing (SRP001803)
190
264
+
Asp
GTC
[SRA]
>SRA1025509
SRR035085.27857
454 Sequencing (SRP001806)
247
173
-
Asp
GTC
[SRA]
>SRA1043943
SRR035092.199396
454 Sequencing (SRP001813)
112
36
-
Asp
GTC
[SRA]
>SRA1049694
SRR035095.120697
454 Sequencing (SRP001816)
286
363
+
Asp
GTC
[SRA]
>SRA1049911
SRR035095.158357
454 Sequencing (SRP001816)
285
362
+
Asp
GTC
[SRA]
>SRA1050147
SRR035095.200471
454 Sequencing (SRP001816)
286
363
+
Asp
GTC
[SRA]
Identical group No.272437 (7 seq.)
>WENV180089157
MPMF02068118
[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
127
203
+
Asp
GTC
[ENA]
¢þ
>WENV183806689
PVBE011138466
[PVBE] marine metagenome; water
3939
3863
-
Asp
GTC
[ENA]
¢þ
>WENV183808868
PVBE011334439
[PVBE] marine metagenome; water
1202
1126
-
Asp
GTC
[ENA]
¢þ
>WENV170779177
LZCG01004371
[LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir
158
84
-
Asp
GTC
[ENA]
¢þ
>SRA1019320
SRR035082.434757
454 Sequencing (SRP001803)
124
50
-
Asp
GTC
[SRA]
>SRA1026579
SRR035085.232454
454 Sequencing (SRP001806)
100
24
-
Asp
GTC
[SRA]
>SRA1044089
SRR035092.222506
454 Sequencing (SRP001813)
83
9
-
Asp
GTC
[SRA]
Identical group No.272817 (7 seq.)
>SRA1019008
SRR035082.385065
454 Sequencing (SRP001803)
349
423
+
Asp
GTC
[SRA]
>SRA1019820
SRR035082.537764
454 Sequencing (SRP001803)
7
83
+
Asp
GTC
[SRA]
>SRA1035937
SRR035089.408662
454 Sequencing (SRP001810)
348
272
-
Asp
GTC
[SRA]
>SRA1041660
SRR035091.275534
454 Sequencing (SRP001812)
216
292
+
Asp
GTC
[SRA]
>SRA1044635
SRR035092.313851
454 Sequencing (SRP001813)
56
130
+
Asp
GTC
[SRA]
>SRA1049638
SRR035095.109363
454 Sequencing (SRP001816)
197
121
-
Asp
GTC
[SRA]
>SRA1050224
SRR035095.215383
454 Sequencing (SRP001816)
197
121
-
Asp
GTC
[SRA]
Identical group No.300809 (2 seq.)
>SRA1032349
SRR035087.610193
454 Sequencing (SRP001808)
437
361
-
Asp
GTC
[SRA]
>SRA1043032
SRR035092.25917
454 Sequencing (SRP001813)
109
33
-
Asp
GTC
[SRA]
Identical group No.303380 (20 seq.)
>W1711386264
MEFC01000039
Alphaproteobacteria
Rhodospirillales bacterium SCN 65-16 [MEFC]
9831
9755
-
Asp
GTC
[ENA]
¡û
>WENV180020530
FTCZ01005552
[FTCZ] metagenome; soil
2266
2342
+
Asp
GTC
[ENA]
¢þ
>WENV180253577
OBEQ010554860
[OBEQ] groundwater metagenome; groundwater
440
364
-
Asp
GTC
[ENA]
¢þ
>WENV180372054
OBOI01029828
[OBOI] sediment metagenome; sediment
349
425
+
Asp
GTC
[ENA]
¢þ
>WENV181385376
OFRI01077234
[OFRI] wastewater metagenome; Exp Tend VB 90WW
88
164
+
Asp
GTC
[ENA]
¢þ
>W141244528
CAKO01000010
Alphaproteobacteria
Reyranella massiliensis 521 [CAKO]
93269
93193
-
Asp
GTC
[ENA]
¡û
>WENV183661843
ORJL010141280
[ORJL] groundwater metagenome; groundwater
888
964
+
Asp
GTC
[ENA]
¢þ
>WENV183669590
ORJL010857206
[ORJL] groundwater metagenome; groundwater
4815
4739
-
Asp
GTC
[ENA]
¢þ
>WENV183676921
ORJL011684540
[ORJL] groundwater metagenome; groundwater
349
273
-
Asp
GTC
[ENA]
¢þ
>WENV170004539
AGTN01712833
[AGTN] bioreactor metagenome; poplar biomass
196
272
+
Asp
GTC
[ENA]
¢þ
>WENV170572680
FLOH01001140
[FLOH] marine metagenome; water
13429
13505
+
Asp
GTC
[ENA]
¢þ
>WENV170706487
LNAP01003492
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
8873
8949
+
Asp
GTC
[ENA]
¢þ
>WENV170709668
LNFM01000574
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
37168
37244
+
Asp
GTC
[ENA]
¢þ
>WENV170712044
LNFM01009370
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
13631
13707
+
Asp
GTC
[ENA]
¢þ
>W141817644
JQKX01000020
Alphaproteobacteria
Thermopetrobacter sp. TC1 [JQKX]
4522
4598
+
Asp
GTC
[ENA]
¡û
>W1910698375
MEMN01000219
Alphaproteobacteria
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 [MEMN]
15430
15354
-
Asp
GTC
[ENA]
¡û
>W1911702313
QOCQ01000012
Alphaproteobacteria
Rhodospirillaceae bacterium SYSU D60007 [QOCQ]
26269
26345
+
Asp
GTC
[ENA]
¡û
>SRA1044688
SRR035092.322662
454 Sequencing (SRP001813)
174
98
-
Asp
GTC
[SRA]
>W1710548235
FODP01000014
Alphaproteobacteria
Rhodospirillales bacterium URHD0017 [FODP]
155521
155597
+
Asp
GTC
[ENA]
¡û
>W1710600342
FUWJ01000001
Alphaproteobacteria
Enhydrobacter aerosaccus [FUWJ]
1263250
1263326
+
Asp
GTC
[ENA]
¡û
Identical group No.358484 (4 seq.)
>WENV170613430
FUWD012803566
[FUWD] metagenome; unknown
220
294
+
Asp
GTC
[ENA]
¢þ
>SRA1017878
SRR035082.209450
454 Sequencing (SRP001803)
284
210
-
Asp
GTC
[SRA]
>SRA1040190
SRR035091.55482
454 Sequencing (SRP001812)
167
241
+
Asp
GTC
[SRA]
>SRA1044731
SRR035092.330595
454 Sequencing (SRP001813)
113
39
-
Asp
GTC
[SRA]
Identical group No.358846 (3 seq.)
>WENV170623599
FUWD013159811
[FUWD] metagenome; unknown
575
651
+
Asp
GTC
[ENA]
¢þ
>WENV170631876
FUWD013369307
[FUWD] metagenome; unknown
575
651
+
Asp
GTC
[ENA]
¢þ
>SRA1044848
SRR035092.356326
454 Sequencing (SRP001813)
140
63
-
Asp
GTC
[SRA]
Identical group No.358939 (7 seq.)
>WENV170626649
FUWD013227893
[FUWD] metagenome; unknown
908
832
-
Asp
GTC
[ENA]
¢þ
>WENV170626908
FUWD013230037
[FUWD] metagenome; unknown
117
193
+
Asp
GTC
[ENA]
¢þ
>SRA1017603
SRR035082.166284
454 Sequencing (SRP001803)
138
214
+
Asp
GTC
[SRA]
>SRA1018129
SRR035082.244168
454 Sequencing (SRP001803)
448
372
-
Asp
GTC
[SRA]
>SRA1019053
SRR035082.392479
454 Sequencing (SRP001803)
143
67
-
Asp
GTC
[SRA]
>SRA1042096
SRR035091.337452
454 Sequencing (SRP001812)
136
60
-
Asp
GTC
[SRA]
>SRA1044160
SRR035092.234025
454 Sequencing (SRP001813)
82
6
-
Asp
GTC
[SRA]
Identical group No.371970 (1 seq.)
>SRA1043493
SRR035092.125416
454 Sequencing (SRP001813)
218
291
+
Asp
GTC
[SRA]
Identical group No.371992 (1 seq.)
>SRA1043724
SRR035092.165731
454 Sequencing (SRP001813)
468
544
+
Asp
GTC
[SRA]
Identical group No.371994 (1 seq.)
>SRA1043733
SRR035092.167033
454 Sequencing (SRP001813)
565
488
-
Asp
GTC
[SRA]
Identical group No.372026 (1 seq.)
>SRA1044137
SRR035092.229523
454 Sequencing (SRP001813)
364
439
+
Asp
GTC
[SRA]
Identical group No.372029 (1 seq.)
>SRA1044152
SRR035092.231814
454 Sequencing (SRP001813)
85
158
+
Asp
GTC
[SRA]
Identical group No.372074 (2 seq.)
>SRA1017419
SRR035082.136234
454 Sequencing (SRP001803)
381
307
-
Asp
GTC
[SRA]
>SRA1044650
SRR035092.316651
454 Sequencing (SRP001813)
162
238
+
Asp
GTC
[SRA]
Identical group No.372095 (1 seq.)
>SRA1044932
SRR035092.374790
454 Sequencing (SRP001813)
170
95
-
Asp
GTC
[SRA]
Identical group No.372103 (1 seq.)
>SRA1044967
SRR035092.381738
454 Sequencing (SRP001813)
355
431
+
Asp
GTC
[SRA]
Identical group No.372119 (1 seq.)
>SRA1045104
SRR035092.410884
454 Sequencing (SRP001813)
321
244
-
Asp
GTC
[SRA]
Identical group No.453444 (10 seq.)
>WENV170605185
FUWD010457190
[FUWD] metagenome; unknown
129
204
+
Asp
GTC
[ENA]
¢þ
>WENV170612743
FUWD012676665
[FUWD] metagenome; unknown
166
241
+
Asp
GTC
[ENA]
¢þ
>SRA1026781
SRR035085.289052
454 Sequencing (SRP001806)
132
207
+
Asp
GTC
[SRA]
>SRA1034014
SRR035088.447471
454 Sequencing (SRP001809)
129
202
+
Asp
GTC
[SRA]
>SRA1042895
SRR035091.462727
454 Sequencing (SRP001812)
143
68
-
Asp
GTC
[SRA]
>SRA1043540
SRR035092.134795
454 Sequencing (SRP001813)
168
93
-
Asp
GTC
[SRA]
>SRA1044743
SRR035092.332736
454 Sequencing (SRP001813)
130
55
-
Asp
GTC
[SRA]
>SRA1048030
SRR035094.95388
454 Sequencing (SRP001815)
119
192
+
Asp
GTC
[SRA]
>SRA1048363
SRR035094.157241
454 Sequencing (SRP001815)
176
251
+
Asp
GTC
[SRA]
>SRA1048626
SRR035094.211617
454 Sequencing (SRP001815)
81
156
+
Asp
GTC
[SRA]
Identical group No.484596 (7 seq.)
>WENV170627329
FUWD013232623
[FUWD] metagenome; unknown
133227
133152
-
Asp
GTC
[ENA]
¢þ
>SRA1024835
SRR035084.415995
454 Sequencing (SRP001805)
53
128
+
Asp
GTC
[SRA]
>SRA1024875
SRR035084.426552
454 Sequencing (SRP001805)
254
179
-
Asp
GTC
[SRA]
>SRA1025238
SRR035084.525089
454 Sequencing (SRP001805)
254
179
-
Asp
GTC
[SRA]
>SRA1028629
SRR035086.378408
454 Sequencing (SRP001807)
48
123
+
Asp
GTC
[SRA]
>SRA1043316
SRR035092.95145
454 Sequencing (SRP001813)
248
323
+
Asp
GTC
[SRA]
>SRA1045385
SRR035093.82749
454 Sequencing (SRP001814)
220
145
-
Asp
GTC
[SRA]
Identical group No.547701 (3 seq.)
>WENV170603393
FUWD010307389
[FUWD] metagenome; unknown
324
399
+
Asp
GTC
[ENA]
¢þ
>SRA1018362
SRR035082.280220
454 Sequencing (SRP001803)
172
247
+
Asp
GTC
[SRA]
>SRA1043868
SRR035092.187955
454 Sequencing (SRP001813)
230
155
-
Asp
GTC
[SRA]
Identical group No.547987 (2 seq.)
>WENV170607971
FUWD010875886
[FUWD] metagenome; unknown
352
426
+
Asp
GTC
[ENA]
¢þ
>SRA1043276
SRR035092.87573
454 Sequencing (SRP001813)
88
162
+
Asp
GTC
[SRA]
Identical group No.548971 (5 seq.)
>WENV170627141
FUWD013231634
[FUWD] metagenome; unknown
6113
6185
+
Asp
GTC
[ENA]
¢þ
>WENV170631944
FUWD013372940
[FUWD] metagenome; unknown
7456
7528
+
Asp
GTC
[ENA]
¢þ
>SRA1017826
SRR035082.203044
454 Sequencing (SRP001803)
268
196
-
Asp
GTC
[SRA]
>SRA1018988
SRR035082.382761
454 Sequencing (SRP001803)
198
270
+
Asp
GTC
[SRA]
>SRA1042991
SRR035092.16293
454 Sequencing (SRP001813)
124
196
+
Asp
GTC
[SRA]
Identical group No.562821 (1 seq.)
>SRA1043013
SRR035092.21068
454 Sequencing (SRP001813)
163
88
-
Asp
GTC
[SRA]
Identical group No.562838 (1 seq.)
>SRA1043178
SRR035092.64739
454 Sequencing (SRP001813)
225
297
+
Asp
GTC
[SRA]
Identical group No.562851 (1 seq.)
>SRA1043270
SRR035092.85907
454 Sequencing (SRP001813)
144
219
+
Asp
GTC
[SRA]
Identical group No.563037 (1 seq.)
>SRA1044987
SRR035092.386886
454 Sequencing (SRP001813)
32
107
+
Asp
GTC
[SRA]
Identical group No.654423 (15 seq.)
>WENV170619951
FUWD013023483
[FUWD] metagenome; unknown
362
435
+
Asp
GTC
[ENA]
¢þ
>WENV170626761
FUWD013229340
[FUWD] metagenome; unknown
15436
15362
-
Asp
GTC
[ENA]
¢þ
>WENV170628077
FUWD013241552
[FUWD] metagenome; unknown
362
435
+
Asp
GTC
[ENA]
¢þ
>SRA1018065
SRR035082.233516
454 Sequencing (SRP001803)
265
338
+
Asp
GTC
[SRA]
>SRA1031687
SRR035087.471674
454 Sequencing (SRP001808)
342
416
+
Asp
GTC
[SRA]
>SRA1032431
SRR035088.6016
454 Sequencing (SRP001809)
119
45
-
Asp
GTC
[SRA]
>SRA1033877
SRR035088.388152
454 Sequencing (SRP001809)
84
11
-
Asp
GTC
[SRA]
>SRA1034230
SRR035089.31823
454 Sequencing (SRP001810)
130
56
-
Asp
GTC
[SRA]
>SRA1039969
SRR035091.1960
454 Sequencing (SRP001812)
119
193
+
Asp
GTC
[SRA]
>SRA1040049
SRR035091.26144
454 Sequencing (SRP001812)
80
6
-
Asp
GTC
[SRA]
>SRA1041306
SRR035091.225933
454 Sequencing (SRP001812)
122
195
+
Asp
GTC
[SRA]
>SRA1041847
SRR035091.304166
454 Sequencing (SRP001812)
467
394
-
Asp
GTC
[SRA]
>SRA1043335
SRR035092.98015
454 Sequencing (SRP001813)
276
349
+
Asp
GTC
[SRA]
>SRA1050071
SRR035095.187282
454 Sequencing (SRP001816)
58
131
+
Asp
GTC
[SRA]
>SRA1050297
SRR035095.233410
454 Sequencing (SRP001816)
149
76
-
Asp
GTC
[SRA]
Identical group No.672451 (6 seq.)
>WENV170611596
FUWD012355284
[FUWD] metagenome; unknown
224
151
-
Asp
GTC
[ENA]
¢þ
>SRA1018305
SRR035082.270354
454 Sequencing (SRP001803)
224
151
-
Asp
GTC
[SRA]
>SRA1030466
SRR035087.282619
454 Sequencing (SRP001808)
73
146
+
Asp
GTC
[SRA]
>SRA1030890
SRR035087.343605
454 Sequencing (SRP001808)
73
146
+
Asp
GTC
[SRA]
>SRA1031052
SRR035087.364864
454 Sequencing (SRP001808)
73
146
+
Asp
GTC
[SRA]
>SRA1044665
SRR035092.319635
454 Sequencing (SRP001813)
160
87
-
Asp
GTC
[SRA]
Identical group No.711016 (3 seq.)
>WENV170611504
FUWD012335037
[FUWD] metagenome; unknown
186
113
-
Asp
GTC
[ENA]
¢þ
>SRA1017184
SRR035082.95352
454 Sequencing (SRP001803)
379
306
-
Asp
GTC
[SRA]
>SRA1043692
SRR035092.161912
454 Sequencing (SRP001813)
186
113
-
Asp
GTC
[SRA]
Identical group No.720208 (2 seq.)
>SRA1042394
SRR035091.381212
454 Sequencing (SRP001812)
579
506
-
Asp
GTC
[SRA]
>SRA1043248
SRR035092.81964
454 Sequencing (SRP001813)
481
405
-
Asp
GTC
[SRA]
Identical group No.720218 (1 seq.)
>SRA1043321
SRR035092.96181
454 Sequencing (SRP001813)
208
137
-
Asp
GTC
[SRA]
Identical group No.720291 (1 seq.)
>SRA1044230
SRR035092.245681
454 Sequencing (SRP001813)
1
72
+
Asp
GTC
[SRA]
Identical group No.720297 (1 seq.)
>SRA1044289
SRR035092.253972
454 Sequencing (SRP001813)
106
180
+
Asp
GTC
[SRA]
Identical group No.720311 (1 seq.)
>SRA1044410
SRR035092.275344
454 Sequencing (SRP001813)
154
228
+
Asp
GTC
[SRA]
Identical group No.720315 (1 seq.)
>SRA1044470
SRR035092.285521
454 Sequencing (SRP001813)
216
290
+
Asp
GTC
[SRA]
Identical group No.720326 (1 seq.)
>SRA1044579
SRR035092.304988
454 Sequencing (SRP001813)
250
322
+
Asp
GTC
[SRA]
Identical group No.720360 (1 seq.)
>SRA1044859
SRR035092.359888
454 Sequencing (SRP001813)
183
256
+
Asp
GTC
[SRA]
Identical group No.720378 (1 seq.)
>SRA1045001
SRR035092.390351
454 Sequencing (SRP001813)
99
172
+
Asp
GTC
[SRA]
Identical group No.720382 (1 seq.)
>SRA1045056
SRR035092.400623
454 Sequencing (SRP001813)
266
193
-
Asp
GTC
[SRA]
Identical group No.779844 (13 seq.)
>WENV170601709
FUWD010188841
[FUWD] metagenome; unknown
472
402
-
Asp
GTC
[ENA]
¢þ
>WENV170607821
FUWD010859048
[FUWD] metagenome; unknown
798
728
-
Asp
GTC
[ENA]
¢þ
>WENV170612656
FUWD012652171
[FUWD] metagenome; unknown
84
154
+
Asp
GTC
[ENA]
¢þ
>WENV170626301
FUWD013218626
[FUWD] metagenome; unknown
262
332
+
Asp
GTC
[ENA]
¢þ
>SRA1018829
SRR035082.354299
454 Sequencing (SRP001803)
103
173
+
Asp
GTC
[SRA]
>SRA1018877
SRR035082.362259
454 Sequencing (SRP001803)
236
166
-
Asp
GTC
[SRA]
>SRA1019387
SRR035082.448082
454 Sequencing (SRP001803)
283
213
-
Asp
GTC
[SRA]
>SRA1019601
SRR035082.484969
454 Sequencing (SRP001803)
31
101
+
Asp
GTC
[SRA]
>SRA1026577
SRR035085.232075
454 Sequencing (SRP001806)
367
297
-
Asp
GTC
[SRA]
>SRA1043059
SRR035092.32039
454 Sequencing (SRP001813)
136
206
+
Asp
GTC
[SRA]
>SRA1044355
SRR035092.265406
454 Sequencing (SRP001813)
86
156
+
Asp
GTC
[SRA]
>SRA1044572
SRR035092.303761
454 Sequencing (SRP001813)
97
27
-
Asp
GTC
[SRA]
>SRA1044762
SRR035092.336369
454 Sequencing (SRP001813)
325
395
+
Asp
GTC
[SRA]
Identical group No.805273 (3 seq.)
>WENV170612483
FUWD012620818
[FUWD] metagenome; unknown
85
158
+
Asp
GTC
[ENA]
¢þ
>SRA1041473
SRR035091.247455
454 Sequencing (SRP001812)
374
447
+
Asp
GTC
[SRA]
>SRA1042957
SRR035092.1494
454 Sequencing (SRP001813)
85
158
+
Asp
GTC
[SRA]
Identical group No.805284 (2 seq.)
>WENV170612594
FUWD012642375
[FUWD] metagenome; unknown
242
170
-
Asp
GTC
[ENA]
¢þ
>SRA1043377
SRR035092.105123
454 Sequencing (SRP001813)
242
170
-
Asp
GTC
[SRA]
Identical group No.805336 (5 seq.)
>WENV170613390
FUWD012800814
[FUWD] metagenome; unknown
671
598
-
Asp
GTC
[ENA]
¢þ
>WENV170621972
FUWD013082315
[FUWD] metagenome; unknown
1896
1823
-
Asp
GTC
[ENA]
¢þ
>WENV170630168
FUWD013297635
[FUWD] metagenome; unknown
1896
1823
-
Asp
GTC
[ENA]
¢þ
>SRA1017124
SRR035082.84781
454 Sequencing (SRP001803)
384
311
-
Asp
GTC
[SRA]
>SRA1043468
SRR035092.121077
454 Sequencing (SRP001813)
375
302
-
Asp
GTC
[SRA]
Identical group No.805543 (4 seq.)
>WENV170626964
FUWD013230555
[FUWD] metagenome; unknown
8987
9059
+
Asp
GTC
[ENA]
¢þ
>WENV170634179
FUWD013411752
[FUWD] metagenome; unknown
13408
13480
+
Asp
GTC
[ENA]
¢þ
>SRA1032481
SRR035088.22141
454 Sequencing (SRP001809)
159
231
+
Asp
GTC
[SRA]
>SRA1044559
SRR035092.301310
454 Sequencing (SRP001813)
418
346
-
Asp
GTC
[SRA]
Identical group No.809555 (1 seq.)
>SRA1044893
SRR035092.369608
454 Sequencing (SRP001813)
80
153
+
Asp
GTC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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