tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = CAG

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.91388 (3 seq.)
>WENV183703741 PDVJ01039831 [PDVJ] alkali sediment metagenome; glacial lake sediment 579 495 - Leu CAG [ENA] ¢þ
>At0662 CP000780 Euryarchaeota Methanoregula boonei 6A8 [CP000780] 1760640 1760724 + Leu CAG [Ensembl] ¡û
>ENV09000361 ABSN01057628 Freshwater sediment metagenome lwFormaldehyde_C1 756 840 + Leu CAG [ENA] ¡û
Identical group No.111659 (1 seq.)
>ENV09000133 ABSN01016128 Freshwater sediment metagenome lwFormaldehyde_C1 13 97 + Leu CAG [ENA] ¡û
Identical group No.118344 (17 seq.)
>WENV181231159 OFEK01011827 [OFEK] activated sludge metagenome; Anaerobic digester 1096 1010 - Leu CAG [ENA] ¢þ
>WENV181413434 OGCK01069247 [OGCK] hot springs metagenome; hot spring sediment 667 751 + Leu CAG [ENA] ¢þ
>WENV170007168 AMWB02092291 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 3024 3110 + Leu CAG [ENA] ¢þ
>WENV170642399 JFJP01040896 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 25406 25492 + Leu CAG [ENA] ¢þ
>WENV170668936 LAHQ01134865 [LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over 85 -1 - Leu CAG [ENA] ¢þ
>WENV170668940 LAHR01000099 [LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over 36490 36404 - Leu CAG [ENA] ¢þ
>WENV170670370 LAHT01004052 [LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over 24 110 + Leu CAG [ENA] ¢þ
>WENV170670793 LAHU01001487 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 6439 6353 - Leu CAG [ENA] ¢þ
>WENV170671428 LAHU01053594 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 137 51 - Leu CAG [ENA] ¢þ
>WENV170970935 MTKX01000628 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 10730 10816 + Leu CAG [ENA] ¢þ
>WENV170970962 MTKX01000784 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 57062 56976 - Leu CAG [ENA] ¢þ
>WENV170975558 MTKZ01001271 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 34891 34805 - Leu CAG [ENA] ¢þ
>WENV170975687 MTKZ01001855 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 5541 5455 - Leu CAG [ENA] ¢þ
>WENV170975689 MTKZ01001863 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 18116 18202 + Leu CAG [ENA] ¢þ
>WENV170976094 MTKZ01004506 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 6094 6008 - Leu CAG [ENA] ¢þ
>SRA1030981 SRR035087.357213 454 Sequencing (SRP001808) 219 305 + Leu CAG [SRA]
>ENV09000144 ABSN01017880 Freshwater sediment metagenome lwFormaldehyde_C1 624 538 - Leu CAG [ENA] ¡û
Identical group No.127432 (6 seq.)
>WENV183680613 ORMF010204253 [ORMF] groundwater metagenome; groundwater 3262 3348 + Leu CAG [ENA] ¢þ
>WENV183686499 ORMF011011982 [ORMF] groundwater metagenome; groundwater 596 510 - Leu CAG [ENA] ¢þ
>WENV183690610 ORMF011625162 [ORMF] groundwater metagenome; groundwater 1967 2053 + Leu CAG [ENA] ¢þ
>WENV183693153 ORMF012034057 [ORMF] groundwater metagenome; groundwater 20915 20829 - Leu CAG [ENA] ¢þ
>WENV170995923 MWWF01092891 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 255 338 + Leu CAG [ENA] ¢þ
>ENV09000283 ABSN01044288 Freshwater sediment metagenome lwFormaldehyde_C1 626 540 - Leu CAG [ENA] ¡û
Identical group No.135841 (8 seq.)
>WENV181165186 OEIR01646842 [OEIR] soil metagenome; soil 99 185 + Leu CAG [ENA] ¢þ
>WENV181184551 OEKJ01000172 [OEKJ] metagenome; 1998 170 87 - Leu CAG [ENA] ¢þ
>WENV181184764 OEKQ01000144 [OEKQ] metagenome; 1998 12251 12334 + Leu CAG [ENA] ¢þ
>WENV170553249 CXWK01012458 [CXWK] wastewater metagenome; activated sludge 329 245 - Leu CAG [ENA] ¢þ
>WENV170555939 CXWL01003302 [CXWL] groundwater metagenome; biofilm material 27966 27882 - Leu CAG [ENA] ¢þ
>WENV170566073 FKKE01005805 [FKKE] freshwater metagenome; freshwater 4107 4024 - Leu CAG [ENA] ¢þ
>WENV170566544 FKKE01044704 [FKKE] freshwater metagenome; freshwater 464 380 - Leu CAG [ENA] ¢þ
>ENV09000254 ABSN01038651 Freshwater sediment metagenome lwFormaldehyde_C1 287 204 - Leu CAG [ENA] ¡û
Identical group No.152646 (1 seq.)
>ENV09000096 ABSN01008921 Freshwater sediment metagenome lwFormaldehyde_C1 646 731 + Leu CAG [ENA] ¡û
Identical group No.152647 (1 seq.)
>ENV09000158 ABSN01020288 Freshwater sediment metagenome lwFormaldehyde_C1 759 673 - Leu CAG [ENA] ¡û
Identical group No.152652 (1 seq.)
>ENV09000278 ABSN01042827 Freshwater sediment metagenome lwFormaldehyde_C1 419 504 + Leu CAG [ENA] ¡û
Identical group No.152653 (1 seq.)
>ENV09000279 ABSN01043970 Freshwater sediment metagenome lwFormaldehyde_C1 317 231 - Leu CAG [ENA] ¡û
Identical group No.179297 (1 seq.)
>ENV09000347 ABSN01056339 Freshwater sediment metagenome lwFormaldehyde_C1 25 107 + Leu CAG [ENA] ¡û
Identical group No.207315 (2 seq.)
>ENV09000401 ABSN01064429 Freshwater sediment metagenome lwFormaldehyde_C1 480 396 - Leu CAG [ENA] ¡û
>C11117274 CP002568 Alphaproteobacteria Polymorphum gilvum SL003B-26A1 [CP002568] 4253817 4253733 - Leu CAG [Ensembl] ¡û
Identical group No.215856 (3 seq.)
>WENV170961646 MLJW01000325 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 5609 5525 - Leu CAG [ENA] ¢þ
>ENV09000186 ABSN01026159 Freshwater sediment metagenome lwFormaldehyde_C1 697 781 + Leu CAG [ENA] ¡û
>ENV09000885 ABSP01056635 Freshwater sediment metagenome lwMethane_C1 330 414 + Leu CAG [ENA] ¡û
Identical group No.217047 (1 seq.)
>ENV09000281 ABSN01044269 Freshwater sediment metagenome lwFormaldehyde_C1 447 363 - Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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