tRNA genes clustered and arranged according to each identical group

Hot springs metagenome ctg_1106445186506

Anticodon = CAT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242904 (8 seq.)
>A171000181 CP000852 Thermoproteota Caldivirga maquilingensis IC-167 [CP000852] 314502 314428 - Met CAT - ¡û
>WENV181228616 OFEH01000458 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 3951 3874 - Ile2 CAT [ENA] ¢þ
>WENV181229099 OFEJ01000321 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 11193 11270 + Ile2 CAT [ENA] ¢þ
>WENV181406995 OGCG01003666 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 2068 2145 + Ile2 CAT [ENA] ¢þ
>ENV09004087 ADKH01000628 Hot springs metagenome ctg_1106445186506 1327 1250 - Met CAT [ENA] ¡û
>W1610000394 AAXQ01000001 Thermoproteota Caldivirga maquilingensis IC-167 [AAXQ] 1017738 1017815 + Met CAT [ENA] ¡û
>W1610584531 LCTF01000012 Thermoproteota Caldivirga sp. MU80 [LCTF] 42500 42577 + Met CAT [ENA] ¡û
>W1610781338 LOCD01000076 Thermoproteota Caldivirga sp. JCHS_4 [LOCD] 791 714 - Met CAT [ENA] ¡û
Identical group No.288141 (17 seq.)
>A171000346 CP001140 Thermoproteota Desulfurococcus amylolyticus 1221n [CP001140] 866453 866527 + Met CAT - ¡û
>A171000986 CP001742 Thermoproteota Acidilobus saccharovorans 345-15 [CP001742] 952531 952604 + Met CAT - ¡û
>A171001681 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 31578 31502 - Met CAT - ¡û
>A171002983 CP003321 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [CP003321] 860070 859996 - Met CAT - ¡û
>A171003910 CP006867 Thermoproteota Ignicoccus islandicus DSM 13165 [CP006867] 160400 160476 + Met CAT - ¡û
>WENV181228576 OFEH01000281 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 1032 1108 + fMet CAT [ENA] ¢þ
>WENV181228627 OFEH01000519 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 9161 9235 + fMet CAT [ENA] ¢þ
>WENV181229249 OFEJ01002363 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 80 153 + fMet CAT [ENA] ¢þ
>WENV181229366 OFEJ01006354 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 2405 2332 - fMet CAT [ENA] ¢þ
>WENV181229367 OFEJ01006628 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 1401 1327 - fMet CAT [ENA] ¢þ
>WENV181406392 OGCG01000204 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 20549 20625 + fMet CAT [ENA] ¢þ
>WENV181407015 OGCG01004101 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 4169 4095 - fMet CAT [ENA] ¢þ
>At2235 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 527572 527496 - Met CAT [Ensembl] ¡û
>W1911654384 QEFF01000036 Thermoproteota Acidilobus sp. SCGC AC-742_E15 [QEFF] 2758 2832 + Met CAT [ENA] ¡û
>ENV09004104 ADKH01001520 Hot springs metagenome ctg_1106445186506 4402 4326 - Met CAT [ENA] ¡û
>W1610004202 AGIW01000001 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [AGIW] 250249 250323 + Met CAT [ENA] ¡û
>W1610040465 AZUU01000002 Thermoproteota Desulfurococcus amylolyticus Z-533 [AZUU] 459852 459926 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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