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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170023663
BCQL01001014
412281
Actinomycetota
CAC
Val
>WENV170023703
BCQL01001397
281005
Actinomycetota
CCA
Trp
>WENV170023707
BCQL01001450
412280
Actinomycetota
GCC
Gly
>WENV170023708
BCQL01001450
429609
Actinomycetota
GCA
Cys
>WENV170023724
BCQL01001963
412281
Actinomycetota
CAC
Val
>WENV170023752
BCQL01002442
281636
Actinomycetota
TTC
Glu
>WENV170023790
BCQL01003622
201607
Actinomycetota
GAA
Phe
>WENV170023788
BCQL01003622
281636
Actinomycetota
TTC
Glu
>WENV170023829
BCQL01005354
480452
Actinomycetota
TTG
Gln
>WENV170023879
BCQL01007469
280803
Actinomycetota
TGC
Ala
>WENV170023926
BCQL01009966
480452
Actinomycetota
TTG
Gln
>WENV170023940
BCQL01010648
280803
Actinomycetota
TGC
Ala
>WENV170024098
BCQL01019593
219578
Actinomycetota
TGG
Pro
>WENV170024106
BCQL01020484
319306
Actinomycetota
CGC
Ala
>WENV170024259
BCQL01034698
319450
Actinomycetota
CCT
Arg
>WENV170024319
BCQL01042158
399007
Actinomycetota
GCA
Cys
>WENV170024324
BCQL01042997
399009
Actinomycetota
CTG
Gln
>WENV170024421
BCQL01057760
480452
Actinomycetota
TTG
Gln
>WENV170024476
BCQL01065050
99889
Actinomycetota
CAG
Leu
>WENV170024585
BCQL01078814
412281
Actinomycetota
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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